Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.72■■■□□ 2.51
Chmp7Q8R1T1 Zxda-201ENSMUST00000117281 2621 ntBASIC30.72■■■□□ 2.51
Chmp7Q8R1T1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Chmp7Q8R1T1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Chmp7Q8R1T1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Chmp7Q8R1T1 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.71■■■□□ 2.51
Chmp7Q8R1T1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.7■■■□□ 2.51
Chmp7Q8R1T1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Chmp7Q8R1T1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Chmp7Q8R1T1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.68■■■□□ 2.5
Chmp7Q8R1T1 Gm4799-201ENSMUST00000095396 657 ntBASIC30.68■■■□□ 2.5
Chmp7Q8R1T1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.67■■■□□ 2.5
Chmp7Q8R1T1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.67■■■□□ 2.5
Chmp7Q8R1T1 Scarna2-201ENSMUST00000157560 414 ntBASIC30.67■■■□□ 2.5
Chmp7Q8R1T1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Chmp7Q8R1T1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Chmp7Q8R1T1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.67■■■□□ 2.5
Chmp7Q8R1T1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.66■■■□□ 2.5
Chmp7Q8R1T1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Chmp7Q8R1T1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.66■■■□□ 2.5
Chmp7Q8R1T1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Chmp7Q8R1T1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Chmp7Q8R1T1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.64■■■□□ 2.5
Chmp7Q8R1T1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Chmp7Q8R1T1 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.64■■■□□ 2.5
Chmp7Q8R1T1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Chmp7Q8R1T1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Chmp7Q8R1T1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Chmp7Q8R1T1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Chmp7Q8R1T1 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.61■■■□□ 2.49
Chmp7Q8R1T1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Chmp7Q8R1T1 Gm37136-201ENSMUST00000194368 194 ntBASIC30.6■■■□□ 2.49
Chmp7Q8R1T1 Gm9806-201ENSMUST00000051080 552 ntBASIC30.6■■■□□ 2.49
Chmp7Q8R1T1 Gm11687-201ENSMUST00000118911 886 ntBASIC30.59■■■□□ 2.49
Chmp7Q8R1T1 Mir3960-201ENSMUST00000198213 73 ntBASIC30.59■■■□□ 2.49
Chmp7Q8R1T1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Chmp7Q8R1T1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Chmp7Q8R1T1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Chmp7Q8R1T1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.57■■■□□ 2.48
Chmp7Q8R1T1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Chmp7Q8R1T1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.57■■■□□ 2.48
Chmp7Q8R1T1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.57■■■□□ 2.48
Chmp7Q8R1T1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Chmp7Q8R1T1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Chmp7Q8R1T1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Chmp7Q8R1T1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Chmp7Q8R1T1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Chmp7Q8R1T1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.53■■■□□ 2.48
Chmp7Q8R1T1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Chmp7Q8R1T1 Gm16437-201ENSMUST00000025669 507 ntBASIC30.52■■■□□ 2.48
Chmp7Q8R1T1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Chmp7Q8R1T1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Chmp7Q8R1T1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Chmp7Q8R1T1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Chmp7Q8R1T1 Gm45364-201ENSMUST00000210883 159 ntBASIC30.51■■■□□ 2.47
Chmp7Q8R1T1 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.48■■■□□ 2.47
Chmp7Q8R1T1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
Chmp7Q8R1T1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Chmp7Q8R1T1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
Chmp7Q8R1T1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Chmp7Q8R1T1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Chmp7Q8R1T1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Chmp7Q8R1T1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
Chmp7Q8R1T1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
Chmp7Q8R1T1 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.44■■■□□ 2.46
Chmp7Q8R1T1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Chmp7Q8R1T1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.44■■■□□ 2.46
Chmp7Q8R1T1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Chmp7Q8R1T1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Chmp7Q8R1T1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Chmp7Q8R1T1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.42■■■□□ 2.46
Chmp7Q8R1T1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Chmp7Q8R1T1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Chmp7Q8R1T1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
Chmp7Q8R1T1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.39■■■□□ 2.46
Chmp7Q8R1T1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.39■■■□□ 2.46
Chmp7Q8R1T1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.39■■■□□ 2.46
Chmp7Q8R1T1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Chmp7Q8R1T1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Chmp7Q8R1T1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.38■■■□□ 2.45
Chmp7Q8R1T1 Gm12366-201ENSMUST00000121722 873 ntBASIC30.38■■■□□ 2.45
Chmp7Q8R1T1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.38■■■□□ 2.45
Chmp7Q8R1T1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.38■■■□□ 2.45
Chmp7Q8R1T1 Gm5786-201ENSMUST00000085368 882 ntBASIC30.38■■■□□ 2.45
Chmp7Q8R1T1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.37■■■□□ 2.45
Chmp7Q8R1T1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Chmp7Q8R1T1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Chmp7Q8R1T1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Chmp7Q8R1T1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Chmp7Q8R1T1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Chmp7Q8R1T1 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.35■■■□□ 2.45
Chmp7Q8R1T1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Chmp7Q8R1T1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Chmp7Q8R1T1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.34■■■□□ 2.45
Chmp7Q8R1T1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Chmp7Q8R1T1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Chmp7Q8R1T1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Chmp7Q8R1T1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Chmp7Q8R1T1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Chmp7Q8R1T1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms