Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Alms1Q8K4E0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Alms1Q8K4E0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.46■■□□□ 1.35
Alms1Q8K4E0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.45■■□□□ 1.34
Alms1Q8K4E0 Gm12366-201ENSMUST00000121722 873 ntBASIC23.45■■□□□ 1.34
Alms1Q8K4E0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.45■■□□□ 1.34
Alms1Q8K4E0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Alms1Q8K4E0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.45■■□□□ 1.34
Alms1Q8K4E0 Gm5786-201ENSMUST00000085368 882 ntBASIC23.45■■□□□ 1.34
Alms1Q8K4E0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Alms1Q8K4E0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Alms1Q8K4E0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.44■■□□□ 1.34
Alms1Q8K4E0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Alms1Q8K4E0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Alms1Q8K4E0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Alms1Q8K4E0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Alms1Q8K4E0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Alms1Q8K4E0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Alms1Q8K4E0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Alms1Q8K4E0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Alms1Q8K4E0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Alms1Q8K4E0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Alms1Q8K4E0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.41■■□□□ 1.34
Alms1Q8K4E0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Alms1Q8K4E0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Alms1Q8K4E0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Alms1Q8K4E0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Alms1Q8K4E0 Zxda-201ENSMUST00000117281 2621 ntBASIC23.39■■□□□ 1.33
Alms1Q8K4E0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Alms1Q8K4E0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Alms1Q8K4E0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Alms1Q8K4E0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Alms1Q8K4E0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.37■■□□□ 1.33
Alms1Q8K4E0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Alms1Q8K4E0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Alms1Q8K4E0 Scarna2-201ENSMUST00000157560 414 ntBASIC23.37■■□□□ 1.33
Alms1Q8K4E0 Gm9806-201ENSMUST00000051080 552 ntBASIC23.37■■□□□ 1.33
Alms1Q8K4E0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Alms1Q8K4E0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Alms1Q8K4E0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Alms1Q8K4E0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.35■■□□□ 1.33
Alms1Q8K4E0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Alms1Q8K4E0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Alms1Q8K4E0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Alms1Q8K4E0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.33■■□□□ 1.33
Alms1Q8K4E0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Alms1Q8K4E0 Gm45364-201ENSMUST00000210883 159 ntBASIC23.32■■□□□ 1.32
Alms1Q8K4E0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Alms1Q8K4E0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Alms1Q8K4E0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.32■■□□□ 1.32
Alms1Q8K4E0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Alms1Q8K4E0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Alms1Q8K4E0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.32■■□□□ 1.32
Alms1Q8K4E0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Alms1Q8K4E0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Alms1Q8K4E0 Gm16437-201ENSMUST00000025669 507 ntBASIC23.3■■□□□ 1.32
Alms1Q8K4E0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Alms1Q8K4E0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Alms1Q8K4E0 Gm22567-201ENSMUST00000175542 342 ntBASIC23.29■■□□□ 1.32
Alms1Q8K4E0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Alms1Q8K4E0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
Alms1Q8K4E0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.29■■□□□ 1.32
Alms1Q8K4E0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.28■■□□□ 1.32
Alms1Q8K4E0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Alms1Q8K4E0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Alms1Q8K4E0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.28■■□□□ 1.32
Alms1Q8K4E0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Alms1Q8K4E0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Alms1Q8K4E0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Alms1Q8K4E0 Gm11687-201ENSMUST00000118911 886 ntBASIC23.26■■□□□ 1.31
Alms1Q8K4E0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Alms1Q8K4E0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Alms1Q8K4E0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.25■■□□□ 1.31
Alms1Q8K4E0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Alms1Q8K4E0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.24■■□□□ 1.31
Alms1Q8K4E0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Alms1Q8K4E0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Alms1Q8K4E0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Alms1Q8K4E0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alms1Q8K4E0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alms1Q8K4E0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Alms1Q8K4E0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Alms1Q8K4E0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Alms1Q8K4E0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Alms1Q8K4E0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Alms1Q8K4E0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Alms1Q8K4E0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Alms1Q8K4E0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.2■■□□□ 1.3
Alms1Q8K4E0 Amer2-203ENSMUST00000225247 2662 ntBASIC23.2■■□□□ 1.3
Alms1Q8K4E0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Alms1Q8K4E0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Alms1Q8K4E0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.2■■□□□ 1.3
Alms1Q8K4E0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Alms1Q8K4E0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alms1Q8K4E0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Alms1Q8K4E0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Alms1Q8K4E0 Gm5812-201ENSMUST00000061073 957 ntBASIC23.18■■□□□ 1.3
Alms1Q8K4E0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Alms1Q8K4E0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Alms1Q8K4E0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms