Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Smc5Q8CG46 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC29.46■■■□□ 2.31
Smc5Q8CG46 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Smc5Q8CG46 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Smc5Q8CG46 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Smc5Q8CG46 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Smc5Q8CG46 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc5Q8CG46 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc5Q8CG46 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Smc5Q8CG46 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
Smc5Q8CG46 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Smc5Q8CG46 Zfp131-205ENSMUST00000223812 663 ntBASIC29.44■■■□□ 2.3
Smc5Q8CG46 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Smc5Q8CG46 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Smc5Q8CG46 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Smc5Q8CG46 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Smc5Q8CG46 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Smc5Q8CG46 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
Smc5Q8CG46 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.41■■■□□ 2.3
Smc5Q8CG46 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Smc5Q8CG46 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Smc5Q8CG46 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smc5Q8CG46 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smc5Q8CG46 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smc5Q8CG46 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.39■■■□□ 2.3
Smc5Q8CG46 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smc5Q8CG46 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smc5Q8CG46 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smc5Q8CG46 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.39■■■□□ 2.29
Smc5Q8CG46 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.38■■■□□ 2.29
Smc5Q8CG46 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Smc5Q8CG46 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc5Q8CG46 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.37■■■□□ 2.29
Smc5Q8CG46 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc5Q8CG46 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc5Q8CG46 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Smc5Q8CG46 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Smc5Q8CG46 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Smc5Q8CG46 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Smc5Q8CG46 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
Smc5Q8CG46 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Smc5Q8CG46 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Smc5Q8CG46 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Smc5Q8CG46 Gm9397-201ENSMUST00000200125 605 ntBASIC29.33■■■□□ 2.29
Smc5Q8CG46 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
Smc5Q8CG46 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Smc5Q8CG46 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
Smc5Q8CG46 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.32■■■□□ 2.28
Smc5Q8CG46 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Smc5Q8CG46 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.31■■■□□ 2.28
Smc5Q8CG46 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Smc5Q8CG46 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
Smc5Q8CG46 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Smc5Q8CG46 Gm24970-201ENSMUST00000175582 82 ntBASIC29.3■■■□□ 2.28
Smc5Q8CG46 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.29■■■□□ 2.28
Smc5Q8CG46 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Smc5Q8CG46 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Smc5Q8CG46 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Smc5Q8CG46 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Smc5Q8CG46 Gm30023-201ENSMUST00000197970 889 ntBASIC29.27■■■□□ 2.28
Smc5Q8CG46 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Smc5Q8CG46 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Smc5Q8CG46 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Smc5Q8CG46 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC29.23■■■□□ 2.27
Smc5Q8CG46 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Smc5Q8CG46 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Smc5Q8CG46 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Smc5Q8CG46 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Smc5Q8CG46 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Smc5Q8CG46 Il17rd-202ENSMUST00000223942 2186 ntBASIC29.2■■■□□ 2.27
Smc5Q8CG46 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.2■■■□□ 2.26
Smc5Q8CG46 Gm37847-201ENSMUST00000192163 1497 ntBASIC29.2■■■□□ 2.26
Smc5Q8CG46 Gm31748-201ENSMUST00000194938 1497 ntBASIC29.2■■■□□ 2.26
Smc5Q8CG46 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Smc5Q8CG46 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Smc5Q8CG46 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
Smc5Q8CG46 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Smc5Q8CG46 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.18■■■□□ 2.26
Smc5Q8CG46 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Smc5Q8CG46 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC29.17■■■□□ 2.26
Smc5Q8CG46 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Smc5Q8CG46 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Smc5Q8CG46 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Smc5Q8CG46 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.15■■■□□ 2.26
Smc5Q8CG46 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Smc5Q8CG46 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Smc5Q8CG46 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Smc5Q8CG46 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Smc5Q8CG46 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Smc5Q8CG46 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
Smc5Q8CG46 Particl-201ENSMUST00000205370 1560 ntBASIC29.12■■■□□ 2.25
Smc5Q8CG46 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
Smc5Q8CG46 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC29.1■■■□□ 2.25
Smc5Q8CG46 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Smc5Q8CG46 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Smc5Q8CG46 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Smc5Q8CG46 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Smc5Q8CG46 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Smc5Q8CG46 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC29.07■■■□□ 2.24
Smc5Q8CG46 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms