Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Vrk1Q80X41 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.57■■□□□ 1.2
Vrk1Q80X41 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.57■■□□□ 1.2
Vrk1Q80X41 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vrk1Q80X41 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vrk1Q80X41 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vrk1Q80X41 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vrk1Q80X41 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vrk1Q80X41 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Vrk1Q80X41 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vrk1Q80X41 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vrk1Q80X41 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Vrk1Q80X41 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vrk1Q80X41 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Vrk1Q80X41 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vrk1Q80X41 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vrk1Q80X41 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vrk1Q80X41 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.52■■□□□ 1.2
Vrk1Q80X41 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.52■■□□□ 1.2
Vrk1Q80X41 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.52■■□□□ 1.2
Vrk1Q80X41 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vrk1Q80X41 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.51■■□□□ 1.19
Vrk1Q80X41 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vrk1Q80X41 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vrk1Q80X41 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vrk1Q80X41 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Vrk1Q80X41 Gm4799-201ENSMUST00000095396 657 ntBASIC22.5■■□□□ 1.19
Vrk1Q80X41 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.49■■□□□ 1.19
Vrk1Q80X41 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vrk1Q80X41 Scarna2-201ENSMUST00000157560 414 ntBASIC22.49■■□□□ 1.19
Vrk1Q80X41 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.49■■□□□ 1.19
Vrk1Q80X41 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vrk1Q80X41 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Vrk1Q80X41 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.49■■□□□ 1.19
Vrk1Q80X41 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vrk1Q80X41 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vrk1Q80X41 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vrk1Q80X41 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vrk1Q80X41 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vrk1Q80X41 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.48■■□□□ 1.19
Vrk1Q80X41 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.46■■□□□ 1.19
Vrk1Q80X41 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.46■■□□□ 1.19
Vrk1Q80X41 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vrk1Q80X41 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.46■■□□□ 1.19
Vrk1Q80X41 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Vrk1Q80X41 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.46■■□□□ 1.19
Vrk1Q80X41 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vrk1Q80X41 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.45■■□□□ 1.18
Vrk1Q80X41 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Vrk1Q80X41 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.45■■□□□ 1.18
Vrk1Q80X41 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vrk1Q80X41 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vrk1Q80X41 Gm9806-201ENSMUST00000051080 552 ntBASIC22.44■■□□□ 1.18
Vrk1Q80X41 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.43■■□□□ 1.18
Vrk1Q80X41 Gm11687-201ENSMUST00000118911 886 ntBASIC22.43■■□□□ 1.18
Vrk1Q80X41 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.43■■□□□ 1.18
Vrk1Q80X41 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.43■■□□□ 1.18
Vrk1Q80X41 Mir3960-201ENSMUST00000198213 73 ntBASIC22.42■■□□□ 1.18
Vrk1Q80X41 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vrk1Q80X41 Gm37136-201ENSMUST00000194368 194 ntBASIC22.41■■□□□ 1.18
Vrk1Q80X41 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vrk1Q80X41 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Vrk1Q80X41 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Vrk1Q80X41 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vrk1Q80X41 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.38■■□□□ 1.17
Vrk1Q80X41 Gm16437-201ENSMUST00000025669 507 ntBASIC22.38■■□□□ 1.17
Vrk1Q80X41 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vrk1Q80X41 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.37■■□□□ 1.17
Vrk1Q80X41 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vrk1Q80X41 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vrk1Q80X41 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vrk1Q80X41 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vrk1Q80X41 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vrk1Q80X41 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vrk1Q80X41 Gm45364-201ENSMUST00000210883 159 ntBASIC22.35■■□□□ 1.17
Vrk1Q80X41 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vrk1Q80X41 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Vrk1Q80X41 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vrk1Q80X41 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vrk1Q80X41 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vrk1Q80X41 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Vrk1Q80X41 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vrk1Q80X41 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vrk1Q80X41 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Vrk1Q80X41 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Vrk1Q80X41 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vrk1Q80X41 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vrk1Q80X41 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vrk1Q80X41 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.31■■□□□ 1.16
Vrk1Q80X41 Gm12366-201ENSMUST00000121722 873 ntBASIC22.31■■□□□ 1.16
Vrk1Q80X41 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.31■■□□□ 1.16
Vrk1Q80X41 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vrk1Q80X41 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vrk1Q80X41 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.31■■□□□ 1.16
Vrk1Q80X41 Gm5786-201ENSMUST00000085368 882 ntBASIC22.31■■□□□ 1.16
Vrk1Q80X41 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vrk1Q80X41 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.3■■□□□ 1.16
Vrk1Q80X41 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.3■■□□□ 1.16
Vrk1Q80X41 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.3■■□□□ 1.16
Vrk1Q80X41 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms