Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smim12Q78RX3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smim12Q78RX3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smim12Q78RX3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smim12Q78RX3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim12Q78RX3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim12Q78RX3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.78■□□□□ 0.76
Smim12Q78RX3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim12Q78RX3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Smim12Q78RX3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim12Q78RX3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smim12Q78RX3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smim12Q78RX3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim12Q78RX3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.75■□□□□ 0.75
Smim12Q78RX3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim12Q78RX3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim12Q78RX3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim12Q78RX3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smim12Q78RX3 Gm24970-201ENSMUST00000175582 82 ntBASIC19.74■□□□□ 0.75
Smim12Q78RX3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.74■□□□□ 0.75
Smim12Q78RX3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smim12Q78RX3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smim12Q78RX3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Smim12Q78RX3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim12Q78RX3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Smim12Q78RX3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim12Q78RX3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smim12Q78RX3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.73■□□□□ 0.75
Smim12Q78RX3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.73■□□□□ 0.75
Smim12Q78RX3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smim12Q78RX3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smim12Q78RX3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim12Q78RX3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smim12Q78RX3 Particl-201ENSMUST00000205370 1560 ntBASIC19.71■□□□□ 0.75
Smim12Q78RX3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.71■□□□□ 0.75
Smim12Q78RX3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim12Q78RX3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smim12Q78RX3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.7■□□□□ 0.74
Smim12Q78RX3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.69■□□□□ 0.74
Smim12Q78RX3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim12Q78RX3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim12Q78RX3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim12Q78RX3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim12Q78RX3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.68■□□□□ 0.74
Smim12Q78RX3 Gm9397-201ENSMUST00000200125 605 ntBASIC19.68■□□□□ 0.74
Smim12Q78RX3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim12Q78RX3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smim12Q78RX3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim12Q78RX3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim12Q78RX3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smim12Q78RX3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.66■□□□□ 0.74
Smim12Q78RX3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.66■□□□□ 0.74
Smim12Q78RX3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim12Q78RX3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smim12Q78RX3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim12Q78RX3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim12Q78RX3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim12Q78RX3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smim12Q78RX3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim12Q78RX3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.64■□□□□ 0.73
Smim12Q78RX3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smim12Q78RX3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.63■□□□□ 0.73
Smim12Q78RX3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim12Q78RX3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim12Q78RX3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smim12Q78RX3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim12Q78RX3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim12Q78RX3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smim12Q78RX3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim12Q78RX3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.62■□□□□ 0.73
Smim12Q78RX3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smim12Q78RX3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim12Q78RX3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim12Q78RX3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Smim12Q78RX3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smim12Q78RX3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smim12Q78RX3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Smim12Q78RX3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim12Q78RX3 Gm30023-201ENSMUST00000197970 889 ntBASIC19.59■□□□□ 0.73
Smim12Q78RX3 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.59■□□□□ 0.73
Smim12Q78RX3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim12Q78RX3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smim12Q78RX3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smim12Q78RX3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smim12Q78RX3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smim12Q78RX3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 1908.3 ms