Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox16Q62247 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Sox16Q62247 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox16Q62247 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox16Q62247 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox16Q62247 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox16Q62247 Notumos-201ENSMUST00000151998 2659 ntBASIC13.68□□□□□ -0.22
Sox16Q62247 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox16Q62247 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox16Q62247 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox16Q62247 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox16Q62247 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox16Q62247 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox16Q62247 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox16Q62247 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox16Q62247 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox16Q62247 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sox16Q62247 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox16Q62247 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox16Q62247 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox16Q62247 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox16Q62247 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox16Q62247 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox16Q62247 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox16Q62247 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox16Q62247 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox16Q62247 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox16Q62247 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox16Q62247 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox16Q62247 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox16Q62247 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox16Q62247 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox16Q62247 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox16Q62247 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox16Q62247 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox16Q62247 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox16Q62247 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox16Q62247 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox16Q62247 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox16Q62247 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox16Q62247 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox16Q62247 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox16Q62247 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox16Q62247 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox16Q62247 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox16Q62247 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox16Q62247 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox16Q62247 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox16Q62247 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox16Q62247 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox16Q62247 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sox16Q62247 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox16Q62247 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox16Q62247 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox16Q62247 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox16Q62247 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox16Q62247 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox16Q62247 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox16Q62247 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox16Q62247 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Sox16Q62247 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox16Q62247 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.58□□□□□ -0.24
Sox16Q62247 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox16Q62247 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox16Q62247 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox16Q62247 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox16Q62247 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox16Q62247 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox16Q62247 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox16Q62247 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox16Q62247 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox16Q62247 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox16Q62247 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox16Q62247 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox16Q62247 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Sox16Q62247 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox16Q62247 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox16Q62247 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox16Q62247 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox16Q62247 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC13.54□□□□□ -0.24
Sox16Q62247 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox16Q62247 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox16Q62247 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox16Q62247 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox16Q62247 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox16Q62247 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox16Q62247 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox16Q62247 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox16Q62247 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox16Q62247 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox16Q62247 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox16Q62247 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sox16Q62247 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox16Q62247 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox16Q62247 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox16Q62247 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox16Q62247 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox16Q62247 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox16Q62247 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sox16Q62247 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms