Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Fndc4Q3TR08 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.85■□□□□ 0.77
Fndc4Q3TR08 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fndc4Q3TR08 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fndc4Q3TR08 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fndc4Q3TR08 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fndc4Q3TR08 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.83■□□□□ 0.77
Fndc4Q3TR08 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Fndc4Q3TR08 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fndc4Q3TR08 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Fndc4Q3TR08 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fndc4Q3TR08 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fndc4Q3TR08 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.82■□□□□ 0.76
Fndc4Q3TR08 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fndc4Q3TR08 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Fndc4Q3TR08 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.81■□□□□ 0.76
Fndc4Q3TR08 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fndc4Q3TR08 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fndc4Q3TR08 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Fndc4Q3TR08 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fndc4Q3TR08 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Fndc4Q3TR08 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.8■□□□□ 0.76
Fndc4Q3TR08 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fndc4Q3TR08 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Fndc4Q3TR08 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fndc4Q3TR08 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fndc4Q3TR08 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fndc4Q3TR08 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.79■□□□□ 0.76
Fndc4Q3TR08 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fndc4Q3TR08 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fndc4Q3TR08 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fndc4Q3TR08 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fndc4Q3TR08 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fndc4Q3TR08 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fndc4Q3TR08 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fndc4Q3TR08 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.77■□□□□ 0.76
Fndc4Q3TR08 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fndc4Q3TR08 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.77■□□□□ 0.75
Fndc4Q3TR08 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fndc4Q3TR08 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fndc4Q3TR08 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fndc4Q3TR08 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Fndc4Q3TR08 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Fndc4Q3TR08 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Fndc4Q3TR08 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Fndc4Q3TR08 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Fndc4Q3TR08 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fndc4Q3TR08 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fndc4Q3TR08 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.74■□□□□ 0.75
Fndc4Q3TR08 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Fndc4Q3TR08 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.74■□□□□ 0.75
Fndc4Q3TR08 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fndc4Q3TR08 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.74■□□□□ 0.75
Fndc4Q3TR08 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fndc4Q3TR08 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Fndc4Q3TR08 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Fndc4Q3TR08 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fndc4Q3TR08 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fndc4Q3TR08 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fndc4Q3TR08 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Fndc4Q3TR08 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fndc4Q3TR08 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Fndc4Q3TR08 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fndc4Q3TR08 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fndc4Q3TR08 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.71■□□□□ 0.75
Fndc4Q3TR08 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fndc4Q3TR08 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Fndc4Q3TR08 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fndc4Q3TR08 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fndc4Q3TR08 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.7■□□□□ 0.74
Fndc4Q3TR08 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Fndc4Q3TR08 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Fndc4Q3TR08 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Fndc4Q3TR08 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fndc4Q3TR08 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fndc4Q3TR08 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fndc4Q3TR08 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fndc4Q3TR08 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Fndc4Q3TR08 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fndc4Q3TR08 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fndc4Q3TR08 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fndc4Q3TR08 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Fndc4Q3TR08 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fndc4Q3TR08 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Fndc4Q3TR08 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fndc4Q3TR08 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fndc4Q3TR08 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.66■□□□□ 0.74
Fndc4Q3TR08 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fndc4Q3TR08 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.65■□□□□ 0.74
Fndc4Q3TR08 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Fndc4Q3TR08 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fndc4Q3TR08 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Fndc4Q3TR08 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fndc4Q3TR08 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Fndc4Q3TR08 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Fndc4Q3TR08 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fndc4Q3TR08 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.64■□□□□ 0.73
Fndc4Q3TR08 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.64■□□□□ 0.73
Fndc4Q3TR08 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fndc4Q3TR08 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms