Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkdcP97313 Gm15546-201ENSMUST00000122095 826 ntBASIC17.03■□□□□ 0.32
PrkdcP97313 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PrkdcP97313 Gm30023-201ENSMUST00000197970 889 ntBASIC17.03■□□□□ 0.32
PrkdcP97313 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkdcP97313 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkdcP97313 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.02■□□□□ 0.31
PrkdcP97313 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.02■□□□□ 0.31
PrkdcP97313 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkdcP97313 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkdcP97313 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PrkdcP97313 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17■□□□□ 0.31
PrkdcP97313 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17■□□□□ 0.31
PrkdcP97313 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.99■□□□□ 0.31
PrkdcP97313 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PrkdcP97313 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PrkdcP97313 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PrkdcP97313 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
PrkdcP97313 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PrkdcP97313 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PrkdcP97313 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PrkdcP97313 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PrkdcP97313 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PrkdcP97313 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PrkdcP97313 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PrkdcP97313 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PrkdcP97313 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.97■□□□□ 0.31
PrkdcP97313 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PrkdcP97313 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PrkdcP97313 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PrkdcP97313 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PrkdcP97313 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PrkdcP97313 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrkdcP97313 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrkdcP97313 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrkdcP97313 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.96■□□□□ 0.31
PrkdcP97313 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PrkdcP97313 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.95■□□□□ 0.3
PrkdcP97313 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrkdcP97313 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrkdcP97313 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrkdcP97313 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PrkdcP97313 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrkdcP97313 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PrkdcP97313 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.93■□□□□ 0.3
PrkdcP97313 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrkdcP97313 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.92■□□□□ 0.3
PrkdcP97313 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PrkdcP97313 Gm15820-201ENSMUST00000201566 728 ntBASIC16.91■□□□□ 0.3
PrkdcP97313 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PrkdcP97313 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PrkdcP97313 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PrkdcP97313 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.9■□□□□ 0.3
PrkdcP97313 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PrkdcP97313 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PrkdcP97313 Mir3960-201ENSMUST00000198213 73 ntBASIC16.89■□□□□ 0.29
PrkdcP97313 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PrkdcP97313 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PrkdcP97313 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.88■□□□□ 0.29
PrkdcP97313 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PrkdcP97313 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PrkdcP97313 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.88■□□□□ 0.29
PrkdcP97313 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PrkdcP97313 Gm10420-201ENSMUST00000121713 882 ntBASIC16.87■□□□□ 0.29
PrkdcP97313 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.87■□□□□ 0.29
PrkdcP97313 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PrkdcP97313 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.86■□□□□ 0.29
PrkdcP97313 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PrkdcP97313 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PrkdcP97313 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PrkdcP97313 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PrkdcP97313 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PrkdcP97313 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PrkdcP97313 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PrkdcP97313 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PrkdcP97313 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PrkdcP97313 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.84■□□□□ 0.29
PrkdcP97313 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PrkdcP97313 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PrkdcP97313 Gm14117-201ENSMUST00000122417 843 ntBASIC16.84■□□□□ 0.29
PrkdcP97313 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.84■□□□□ 0.29
PrkdcP97313 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.83■□□□□ 0.29
PrkdcP97313 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PrkdcP97313 Rps24-207ENSMUST00000224568 714 ntBASIC16.83■□□□□ 0.28
PrkdcP97313 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PrkdcP97313 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.83■□□□□ 0.28
PrkdcP97313 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PrkdcP97313 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PrkdcP97313 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.82■□□□□ 0.28
PrkdcP97313 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PrkdcP97313 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PrkdcP97313 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PrkdcP97313 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PrkdcP97313 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.81■□□□□ 0.28
PrkdcP97313 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PrkdcP97313 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PrkdcP97313 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.81■□□□□ 0.28
PrkdcP97313 Gm45102-201ENSMUST00000207427 857 ntBASIC16.81■□□□□ 0.28
PrkdcP97313 Serp2-204ENSMUST00000228055 705 ntBASIC16.81■□□□□ 0.28
PrkdcP97313 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms