Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,51
Msh6P54276 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,51
Msh6P54276 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,51
Msh6P54276 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30,7■■■□□ 2,51
Msh6P54276 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30,7■■■□□ 2,5
Msh6P54276 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30,69■■■□□ 2,5
Msh6P54276 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Msh6P54276 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30,68■■■□□ 2,5
Msh6P54276 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Msh6P54276 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30,67■■■□□ 2,5
Msh6P54276 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30,67■■■□□ 2,5
Msh6P54276 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Msh6P54276 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Msh6P54276 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30,66■■■□□ 2,5
Msh6P54276 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
Msh6P54276 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30,65■■■□□ 2,5
Msh6P54276 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Msh6P54276 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30,64■■■□□ 2,5
Msh6P54276 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30,63■■■□□ 2,49
Msh6P54276 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30,63■■■□□ 2,49
Msh6P54276 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30,63■■■□□ 2,49
Msh6P54276 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Msh6P54276 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30,62■■■□□ 2,49
Msh6P54276 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Msh6P54276 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Msh6P54276 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30,61■■■□□ 2,49
Msh6P54276 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Msh6P54276 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30,6■■■□□ 2,49
Msh6P54276 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30,59■■■□□ 2,49
Msh6P54276 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30,59■■■□□ 2,49
Msh6P54276 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30,58■■■□□ 2,49
Msh6P54276 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30,57■■■□□ 2,48
Msh6P54276 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Msh6P54276 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Msh6P54276 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Msh6P54276 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Msh6P54276 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Msh6P54276 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30,54■■■□□ 2,48
Msh6P54276 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30,54■■■□□ 2,48
Msh6P54276 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30,54■■■□□ 2,48
Msh6P54276 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30,54■■■□□ 2,48
Msh6P54276 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Msh6P54276 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30,54■■■□□ 2,48
Msh6P54276 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Msh6P54276 Amer2-203ENSMUST00000225247 2662 ntBASIC30,52■■■□□ 2,48
Msh6P54276 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30,51■■■□□ 2,47
Msh6P54276 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30,51■■■□□ 2,47
Msh6P54276 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,47
Msh6P54276 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30,5■■■□□ 2,47
Msh6P54276 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30,48■■■□□ 2,47
Msh6P54276 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Msh6P54276 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Msh6P54276 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Msh6P54276 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Msh6P54276 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Msh6P54276 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Msh6P54276 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Msh6P54276 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30,46■■■□□ 2,47
Msh6P54276 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Msh6P54276 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Msh6P54276 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30,44■■■□□ 2,46
Msh6P54276 Scarna2-201ENSMUST00000157560 414 ntBASIC30,43■■■□□ 2,46
Msh6P54276 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Msh6P54276 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30,43■■■□□ 2,46
Msh6P54276 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30,43■■■□□ 2,46
Msh6P54276 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Msh6P54276 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30,43■■■□□ 2,46
Msh6P54276 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30,42■■■□□ 2,46
Msh6P54276 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30,42■■■□□ 2,46
Msh6P54276 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30,42■■■□□ 2,46
Msh6P54276 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30,41■■■□□ 2,46
Msh6P54276 Gm12366-201ENSMUST00000121722 873 ntBASIC30,41■■■□□ 2,46
Msh6P54276 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30,41■■■□□ 2,46
Msh6P54276 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30,41■■■□□ 2,46
Msh6P54276 Gm5786-201ENSMUST00000085368 882 ntBASIC30,41■■■□□ 2,46
Msh6P54276 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Msh6P54276 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Msh6P54276 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Msh6P54276 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30,4■■■□□ 2,46
Msh6P54276 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30,4■■■□□ 2,46
Msh6P54276 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Msh6P54276 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Msh6P54276 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Msh6P54276 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Msh6P54276 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30,38■■■□□ 2,45
Msh6P54276 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Msh6P54276 Gm9806-201ENSMUST00000051080 552 ntBASIC30,38■■■□□ 2,45
Msh6P54276 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Msh6P54276 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Msh6P54276 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30,37■■■□□ 2,45
Msh6P54276 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30,36■■■□□ 2,45
Msh6P54276 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30,36■■■□□ 2,45
Msh6P54276 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30,36■■■□□ 2,45
Msh6P54276 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30,35■■■□□ 2,45
Msh6P54276 Gm11687-201ENSMUST00000118911 886 ntBASIC30,34■■■□□ 2,45
Msh6P54276 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30,34■■■□□ 2,45
Msh6P54276 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30,34■■■□□ 2,45
Msh6P54276 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30,34■■■□□ 2,45
Msh6P54276 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30,33■■■□□ 2,45
Msh6P54276 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30,33■■■□□ 2,45
Retrieved 100 of 76,532 protein–RNA pairs in 17,5 ms