Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa3P02831 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa3P02831 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa3P02831 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa3P02831 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxa3P02831 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxa3P02831 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa3P02831 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa3P02831 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.62■□□□□ 0.73
Hoxa3P02831 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hoxa3P02831 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa3P02831 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.61■□□□□ 0.73
Hoxa3P02831 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa3P02831 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa3P02831 Amer2-203ENSMUST00000225247 2662 ntBASIC19.61■□□□□ 0.73
Hoxa3P02831 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.6■□□□□ 0.73
Hoxa3P02831 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.6■□□□□ 0.73
Hoxa3P02831 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hoxa3P02831 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Hoxa3P02831 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.58■□□□□ 0.72
Hoxa3P02831 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hoxa3P02831 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa3P02831 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa3P02831 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa3P02831 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa3P02831 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa3P02831 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa3P02831 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.57■□□□□ 0.72
Hoxa3P02831 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa3P02831 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa3P02831 Particl-201ENSMUST00000205370 1560 ntBASIC19.57■□□□□ 0.72
Hoxa3P02831 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa3P02831 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Hoxa3P02831 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hoxa3P02831 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa3P02831 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa3P02831 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.56■□□□□ 0.72
Hoxa3P02831 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa3P02831 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa3P02831 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Hoxa3P02831 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hoxa3P02831 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.54■□□□□ 0.72
Hoxa3P02831 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.54■□□□□ 0.72
Hoxa3P02831 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa3P02831 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa3P02831 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa3P02831 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa3P02831 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.53■□□□□ 0.72
Hoxa3P02831 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa3P02831 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa3P02831 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa3P02831 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa3P02831 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa3P02831 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa3P02831 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa3P02831 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.51■□□□□ 0.71
Hoxa3P02831 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Hoxa3P02831 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa3P02831 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa3P02831 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa3P02831 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa3P02831 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa3P02831 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hoxa3P02831 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa3P02831 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hoxa3P02831 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa3P02831 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa3P02831 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa3P02831 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa3P02831 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa3P02831 Gm11175-201ENSMUST00000116172 543 ntBASIC19.47■□□□□ 0.71
Hoxa3P02831 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa3P02831 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hoxa3P02831 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa3P02831 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Hoxa3P02831 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa3P02831 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa3P02831 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.46■□□□□ 0.71
Hoxa3P02831 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa3P02831 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa3P02831 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa3P02831 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hoxa3P02831 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.44■□□□□ 0.7
Hoxa3P02831 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa3P02831 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa3P02831 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxa3P02831 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa3P02831 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa3P02831 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa3P02831 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa3P02831 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa3P02831 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa3P02831 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa3P02831 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa3P02831 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Hoxa3P02831 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.4■□□□□ 0.7
Hoxa3P02831 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxa3P02831 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.39■□□□□ 0.69
Hoxa3P02831 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Hoxa3P02831 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms