Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Ubr1O70481 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ubr1O70481 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.79■■■□□ 2.68
Ubr1O70481 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.79■■■□□ 2.68
Ubr1O70481 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.78■■■□□ 2.68
Ubr1O70481 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ubr1O70481 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.78■■■□□ 2.68
Ubr1O70481 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.78■■■□□ 2.68
Ubr1O70481 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ubr1O70481 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ubr1O70481 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ubr1O70481 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.75■■■□□ 2.67
Ubr1O70481 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ubr1O70481 Zxda-201ENSMUST00000117281 2621 ntBASIC31.74■■■□□ 2.67
Ubr1O70481 Gm37136-201ENSMUST00000194368 194 ntBASIC31.74■■■□□ 2.67
Ubr1O70481 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ubr1O70481 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ubr1O70481 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.72■■■□□ 2.67
Ubr1O70481 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ubr1O70481 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Ubr1O70481 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ubr1O70481 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ubr1O70481 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.68■■■□□ 2.66
Ubr1O70481 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ubr1O70481 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.68■■■□□ 2.66
Ubr1O70481 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.68■■■□□ 2.66
Ubr1O70481 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ubr1O70481 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ubr1O70481 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.66■■■□□ 2.66
Ubr1O70481 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ubr1O70481 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.66■■■□□ 2.66
Ubr1O70481 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Ubr1O70481 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ubr1O70481 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ubr1O70481 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ubr1O70481 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.63■■■□□ 2.65
Ubr1O70481 AC154454.1-201ENSMUST00000225253 216 ntBASIC31.63■■■□□ 2.65
Ubr1O70481 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Ubr1O70481 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Ubr1O70481 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Ubr1O70481 Scarna2-201ENSMUST00000157560 414 ntBASIC31.61■■■□□ 2.65
Ubr1O70481 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Ubr1O70481 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ubr1O70481 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.58■■■□□ 2.65
Ubr1O70481 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Ubr1O70481 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.57■■■□□ 2.64
Ubr1O70481 Mir3960-201ENSMUST00000198213 73 ntBASIC31.57■■■□□ 2.64
Ubr1O70481 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.56■■■□□ 2.64
Ubr1O70481 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ubr1O70481 Gm9806-201ENSMUST00000051080 552 ntBASIC31.56■■■□□ 2.64
Ubr1O70481 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.56■■■□□ 2.64
Ubr1O70481 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Ubr1O70481 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31.55■■■□□ 2.64
Ubr1O70481 Gm4799-201ENSMUST00000095396 657 ntBASIC31.55■■■□□ 2.64
Ubr1O70481 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.54■■■□□ 2.64
Ubr1O70481 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ubr1O70481 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ubr1O70481 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ubr1O70481 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ubr1O70481 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Ubr1O70481 Gm11687-201ENSMUST00000118911 886 ntBASIC31.52■■■□□ 2.64
Ubr1O70481 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ubr1O70481 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ubr1O70481 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Ubr1O70481 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
Ubr1O70481 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ubr1O70481 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ubr1O70481 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.49■■■□□ 2.63
Ubr1O70481 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ubr1O70481 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ubr1O70481 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC31.45■■■□□ 2.63
Ubr1O70481 Gm12366-201ENSMUST00000121722 873 ntBASIC31.45■■■□□ 2.63
Ubr1O70481 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC31.45■■■□□ 2.63
Ubr1O70481 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC31.45■■■□□ 2.63
Ubr1O70481 Gm5786-201ENSMUST00000085368 882 ntBASIC31.45■■■□□ 2.63
Ubr1O70481 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC31.44■■■□□ 2.62
Ubr1O70481 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ubr1O70481 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ubr1O70481 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ubr1O70481 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ubr1O70481 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ubr1O70481 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ubr1O70481 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ubr1O70481 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.42■■■□□ 2.62
Ubr1O70481 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ubr1O70481 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ubr1O70481 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ubr1O70481 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ubr1O70481 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Ubr1O70481 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.4■■■□□ 2.62
Ubr1O70481 Gm27502-201ENSMUST00000183495 199 ntBASIC31.4■■■□□ 2.62
Ubr1O70481 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ubr1O70481 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ubr1O70481 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Ubr1O70481 Gm16437-201ENSMUST00000025669 507 ntBASIC31.38■■■□□ 2.61
Ubr1O70481 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ubr1O70481 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ubr1O70481 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ubr1O70481 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
Ubr1O70481 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms