Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Prom1O54990 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Prom1O54990 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.56■■□□□ 1.84
Prom1O54990 Scarna2-201ENSMUST00000157560 414 ntBASIC26.56■■□□□ 1.84
Prom1O54990 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Prom1O54990 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Prom1O54990 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prom1O54990 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Prom1O54990 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prom1O54990 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Prom1O54990 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Prom1O54990 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Prom1O54990 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Prom1O54990 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Prom1O54990 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Prom1O54990 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Prom1O54990 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Prom1O54990 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Prom1O54990 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Prom1O54990 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Prom1O54990 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Prom1O54990 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.5■■□□□ 1.83
Prom1O54990 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Prom1O54990 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.48■■□□□ 1.83
Prom1O54990 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
Prom1O54990 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.47■■□□□ 1.83
Prom1O54990 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.47■■□□□ 1.83
Prom1O54990 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Prom1O54990 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.47■■□□□ 1.83
Prom1O54990 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Prom1O54990 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.45■■□□□ 1.82
Prom1O54990 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.44■■□□□ 1.82
Prom1O54990 Gm16437-201ENSMUST00000025669 507 ntBASIC26.44■■□□□ 1.82
Prom1O54990 Gm4799-201ENSMUST00000095396 657 ntBASIC26.44■■□□□ 1.82
Prom1O54990 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Prom1O54990 Gm45364-201ENSMUST00000210883 159 ntBASIC26.43■■□□□ 1.82
Prom1O54990 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Prom1O54990 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Prom1O54990 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.42■■□□□ 1.82
Prom1O54990 Gm9806-201ENSMUST00000051080 552 ntBASIC26.42■■□□□ 1.82
Prom1O54990 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prom1O54990 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.41■■□□□ 1.82
Prom1O54990 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.41■■□□□ 1.82
Prom1O54990 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Prom1O54990 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Prom1O54990 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Prom1O54990 Gm37136-201ENSMUST00000194368 194 ntBASIC26.39■■□□□ 1.82
Prom1O54990 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Prom1O54990 Gm11687-201ENSMUST00000118911 886 ntBASIC26.38■■□□□ 1.81
Prom1O54990 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Prom1O54990 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.37■■□□□ 1.81
Prom1O54990 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Prom1O54990 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.37■■□□□ 1.81
Prom1O54990 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Prom1O54990 Mir3960-201ENSMUST00000198213 73 ntBASIC26.37■■□□□ 1.81
Prom1O54990 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Prom1O54990 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Prom1O54990 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Prom1O54990 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.35■■□□□ 1.81
Prom1O54990 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Prom1O54990 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.34■■□□□ 1.81
Prom1O54990 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.34■■□□□ 1.81
Prom1O54990 Gm12366-201ENSMUST00000121722 873 ntBASIC26.34■■□□□ 1.81
Prom1O54990 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.34■■□□□ 1.81
Prom1O54990 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.34■■□□□ 1.81
Prom1O54990 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.34■■□□□ 1.81
Prom1O54990 Gm5786-201ENSMUST00000085368 882 ntBASIC26.34■■□□□ 1.81
Prom1O54990 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.33■■□□□ 1.81
Prom1O54990 Gm27502-201ENSMUST00000183495 199 ntBASIC26.33■■□□□ 1.81
Prom1O54990 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Prom1O54990 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.32■■□□□ 1.8
Prom1O54990 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Prom1O54990 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Prom1O54990 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Prom1O54990 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prom1O54990 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
Prom1O54990 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Prom1O54990 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Prom1O54990 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Prom1O54990 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Prom1O54990 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.3■■□□□ 1.8
Prom1O54990 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Prom1O54990 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.3■■□□□ 1.8
Prom1O54990 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Prom1O54990 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Prom1O54990 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prom1O54990 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.28■■□□□ 1.8
Prom1O54990 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prom1O54990 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
Prom1O54990 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prom1O54990 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Prom1O54990 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Prom1O54990 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.26■■□□□ 1.79
Prom1O54990 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.26■■□□□ 1.79
Prom1O54990 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prom1O54990 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
Prom1O54990 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prom1O54990 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prom1O54990 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prom1O54990 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms