Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.2□□□□□ -0.3
Ubr4A2AN08 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubr4A2AN08 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubr4A2AN08 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ubr4A2AN08 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubr4A2AN08 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.19□□□□□ -0.3
Ubr4A2AN08 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubr4A2AN08 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubr4A2AN08 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubr4A2AN08 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ubr4A2AN08 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.19□□□□□ -0.3
Ubr4A2AN08 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.19□□□□□ -0.3
Ubr4A2AN08 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ubr4A2AN08 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr4A2AN08 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr4A2AN08 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr4A2AN08 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr4A2AN08 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.18□□□□□ -0.3
Ubr4A2AN08 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr4A2AN08 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubr4A2AN08 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr4A2AN08 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr4A2AN08 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr4A2AN08 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubr4A2AN08 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.17□□□□□ -0.3
Ubr4A2AN08 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ubr4A2AN08 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.16□□□□□ -0.3
Ubr4A2AN08 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr4A2AN08 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr4A2AN08 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ubr4A2AN08 Particl-201ENSMUST00000205370 1560 ntBASIC13.15□□□□□ -0.3
Ubr4A2AN08 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr4A2AN08 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ubr4A2AN08 Gm45364-201ENSMUST00000210883 159 ntBASIC13.15□□□□□ -0.3
Ubr4A2AN08 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubr4A2AN08 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubr4A2AN08 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC13.14□□□□□ -0.31
Ubr4A2AN08 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ubr4A2AN08 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.14□□□□□ -0.31
Ubr4A2AN08 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubr4A2AN08 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ubr4A2AN08 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ubr4A2AN08 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ubr4A2AN08 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.13□□□□□ -0.31
Ubr4A2AN08 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ubr4A2AN08 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr4A2AN08 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr4A2AN08 Gm10420-201ENSMUST00000121713 882 ntBASIC13.12□□□□□ -0.31
Ubr4A2AN08 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr4A2AN08 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.11□□□□□ -0.31
Ubr4A2AN08 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr4A2AN08 Gm9959-201ENSMUST00000068277 390 ntBASIC13.11□□□□□ -0.31
Ubr4A2AN08 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr4A2AN08 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr4A2AN08 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr4A2AN08 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
Ubr4A2AN08 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.1□□□□□ -0.31
Ubr4A2AN08 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr4A2AN08 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr4A2AN08 Gm37847-201ENSMUST00000192163 1497 ntBASIC13.1□□□□□ -0.31
Ubr4A2AN08 Gm31748-201ENSMUST00000194938 1497 ntBASIC13.1□□□□□ -0.31
Ubr4A2AN08 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.1□□□□□ -0.31
Ubr4A2AN08 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr4A2AN08 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubr4A2AN08 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ubr4A2AN08 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.09□□□□□ -0.31
Ubr4A2AN08 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubr4A2AN08 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.09□□□□□ -0.31
Ubr4A2AN08 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ubr4A2AN08 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.09□□□□□ -0.31
Ubr4A2AN08 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubr4A2AN08 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ubr4A2AN08 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubr4A2AN08 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ubr4A2AN08 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ubr4A2AN08 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC13.07□□□□□ -0.32
Ubr4A2AN08 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ubr4A2AN08 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.07□□□□□ -0.32
Ubr4A2AN08 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.06□□□□□ -0.32
Ubr4A2AN08 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubr4A2AN08 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubr4A2AN08 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubr4A2AN08 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ubr4A2AN08 Gm13238-201ENSMUST00000117655 780 ntBASIC13.06□□□□□ -0.32
Ubr4A2AN08 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ubr4A2AN08 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ubr4A2AN08 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ubr4A2AN08 Gm30346-201ENSMUST00000218641 1699 ntBASIC13.05□□□□□ -0.32
Ubr4A2AN08 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ubr4A2AN08 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ubr4A2AN08 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ubr4A2AN08 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ubr4A2AN08 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ubr4A2AN08 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ubr4A2AN08 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ubr4A2AN08 Gm45444-201ENSMUST00000211394 898 ntBASIC13.04□□□□□ -0.32
Ubr4A2AN08 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ubr4A2AN08 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.03□□□□□ -0.32
Ubr4A2AN08 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ubr4A2AN08 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 520.5 ms