Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm28729A0A1B0GSW2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Gm28729A0A1B0GSW2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm28729A0A1B0GSW2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Gm28729A0A1B0GSW2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.48■■□□□ 1.35
Gm28729A0A1B0GSW2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Gm28729A0A1B0GSW2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm28729A0A1B0GSW2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.47■■□□□ 1.35
Gm28729A0A1B0GSW2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Gm28729A0A1B0GSW2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Gm28729A0A1B0GSW2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.47■■□□□ 1.35
Gm28729A0A1B0GSW2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.47■■□□□ 1.35
Gm28729A0A1B0GSW2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm28729A0A1B0GSW2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm28729A0A1B0GSW2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm28729A0A1B0GSW2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm28729A0A1B0GSW2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm28729A0A1B0GSW2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Gm28729A0A1B0GSW2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Gm28729A0A1B0GSW2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Gm28729A0A1B0GSW2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.44■■□□□ 1.34
Gm28729A0A1B0GSW2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm28729A0A1B0GSW2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.43■■□□□ 1.34
Gm28729A0A1B0GSW2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm28729A0A1B0GSW2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Gm28729A0A1B0GSW2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm28729A0A1B0GSW2 Scarna2-201ENSMUST00000157560 414 ntBASIC23.4■■□□□ 1.34
Gm28729A0A1B0GSW2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.4■■□□□ 1.34
Gm28729A0A1B0GSW2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm28729A0A1B0GSW2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Gm28729A0A1B0GSW2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Gm28729A0A1B0GSW2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Gm28729A0A1B0GSW2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Gm28729A0A1B0GSW2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm28729A0A1B0GSW2 Gm4799-201ENSMUST00000095396 657 ntBASIC23.38■■□□□ 1.33
Gm28729A0A1B0GSW2 Gm37136-201ENSMUST00000194368 194 ntBASIC23.37■■□□□ 1.33
Gm28729A0A1B0GSW2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm28729A0A1B0GSW2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Gm28729A0A1B0GSW2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.35■■□□□ 1.33
Gm28729A0A1B0GSW2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm28729A0A1B0GSW2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.34■■□□□ 1.33
Gm28729A0A1B0GSW2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm28729A0A1B0GSW2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
Gm28729A0A1B0GSW2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
Gm28729A0A1B0GSW2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.33
Gm28729A0A1B0GSW2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm28729A0A1B0GSW2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
Gm28729A0A1B0GSW2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.33■■□□□ 1.32
Gm28729A0A1B0GSW2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Gm28729A0A1B0GSW2 Mir3960-201ENSMUST00000198213 73 ntBASIC23.32■■□□□ 1.32
Gm28729A0A1B0GSW2 Gm45364-201ENSMUST00000210883 159 ntBASIC23.32■■□□□ 1.32
Gm28729A0A1B0GSW2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Gm28729A0A1B0GSW2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Gm28729A0A1B0GSW2 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.31■■□□□ 1.32
Gm28729A0A1B0GSW2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Gm28729A0A1B0GSW2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.3■■□□□ 1.32
Gm28729A0A1B0GSW2 Gm16437-201ENSMUST00000025669 507 ntBASIC23.3■■□□□ 1.32
Gm28729A0A1B0GSW2 Gm9806-201ENSMUST00000051080 552 ntBASIC23.3■■□□□ 1.32
Gm28729A0A1B0GSW2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.3■■□□□ 1.32
Gm28729A0A1B0GSW2 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.29■■□□□ 1.32
Gm28729A0A1B0GSW2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Gm28729A0A1B0GSW2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Gm28729A0A1B0GSW2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm28729A0A1B0GSW2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Gm28729A0A1B0GSW2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm28729A0A1B0GSW2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm28729A0A1B0GSW2 Gm11687-201ENSMUST00000118911 886 ntBASIC23.26■■□□□ 1.31
Gm28729A0A1B0GSW2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Gm28729A0A1B0GSW2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm28729A0A1B0GSW2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Gm28729A0A1B0GSW2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm28729A0A1B0GSW2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Gm28729A0A1B0GSW2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm28729A0A1B0GSW2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.24■■□□□ 1.31
Gm28729A0A1B0GSW2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
Gm28729A0A1B0GSW2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm28729A0A1B0GSW2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Gm28729A0A1B0GSW2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm28729A0A1B0GSW2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm28729A0A1B0GSW2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm28729A0A1B0GSW2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm28729A0A1B0GSW2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm28729A0A1B0GSW2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm28729A0A1B0GSW2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm28729A0A1B0GSW2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.19■■□□□ 1.3
Gm28729A0A1B0GSW2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm28729A0A1B0GSW2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.19■■□□□ 1.3
Gm28729A0A1B0GSW2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Gm28729A0A1B0GSW2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm12366-201ENSMUST00000121722 873 ntBASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm5786-201ENSMUST00000085368 882 ntBASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms