Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BC053393A0A0B4J1F6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.71■□□□□ 0.59
BC053393A0A0B4J1F6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BC053393A0A0B4J1F6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BC053393A0A0B4J1F6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BC053393A0A0B4J1F6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.7■□□□□ 0.58
BC053393A0A0B4J1F6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BC053393A0A0B4J1F6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
BC053393A0A0B4J1F6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BC053393A0A0B4J1F6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BC053393A0A0B4J1F6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BC053393A0A0B4J1F6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BC053393A0A0B4J1F6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BC053393A0A0B4J1F6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BC053393A0A0B4J1F6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BC053393A0A0B4J1F6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BC053393A0A0B4J1F6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BC053393A0A0B4J1F6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BC053393A0A0B4J1F6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
BC053393A0A0B4J1F6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BC053393A0A0B4J1F6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BC053393A0A0B4J1F6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BC053393A0A0B4J1F6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.65■□□□□ 0.58
BC053393A0A0B4J1F6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BC053393A0A0B4J1F6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BC053393A0A0B4J1F6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.64■□□□□ 0.58
BC053393A0A0B4J1F6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BC053393A0A0B4J1F6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC053393A0A0B4J1F6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC053393A0A0B4J1F6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC053393A0A0B4J1F6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.63■□□□□ 0.57
BC053393A0A0B4J1F6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
BC053393A0A0B4J1F6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC053393A0A0B4J1F6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BC053393A0A0B4J1F6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC053393A0A0B4J1F6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BC053393A0A0B4J1F6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC053393A0A0B4J1F6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.61■□□□□ 0.57
BC053393A0A0B4J1F6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC053393A0A0B4J1F6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.6■□□□□ 0.57
BC053393A0A0B4J1F6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC053393A0A0B4J1F6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC053393A0A0B4J1F6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BC053393A0A0B4J1F6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC053393A0A0B4J1F6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.59■□□□□ 0.57
BC053393A0A0B4J1F6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BC053393A0A0B4J1F6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BC053393A0A0B4J1F6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
BC053393A0A0B4J1F6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BC053393A0A0B4J1F6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BC053393A0A0B4J1F6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BC053393A0A0B4J1F6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BC053393A0A0B4J1F6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BC053393A0A0B4J1F6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.56■□□□□ 0.56
BC053393A0A0B4J1F6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
BC053393A0A0B4J1F6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BC053393A0A0B4J1F6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BC053393A0A0B4J1F6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BC053393A0A0B4J1F6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BC053393A0A0B4J1F6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BC053393A0A0B4J1F6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Gm9397-201ENSMUST00000200125 605 ntBASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.54■□□□□ 0.56
BC053393A0A0B4J1F6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 Gm45855-201ENSMUST00000212546 880 ntBASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BC053393A0A0B4J1F6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BC053393A0A0B4J1F6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BC053393A0A0B4J1F6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BC053393A0A0B4J1F6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.52■□□□□ 0.56
BC053393A0A0B4J1F6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC053393A0A0B4J1F6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BC053393A0A0B4J1F6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC053393A0A0B4J1F6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC053393A0A0B4J1F6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BC053393A0A0B4J1F6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC053393A0A0B4J1F6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
BC053393A0A0B4J1F6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
BC053393A0A0B4J1F6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BC053393A0A0B4J1F6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms