Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4d-3A0A075B625 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4d-3A0A075B625 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4d-3A0A075B625 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav4d-3A0A075B625 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4d-3A0A075B625 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav4d-3A0A075B625 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4d-3A0A075B625 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav4d-3A0A075B625 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4d-3A0A075B625 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4d-3A0A075B625 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav4d-3A0A075B625 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav4d-3A0A075B625 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav4d-3A0A075B625 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16■□□□□ 0.15
Trav4d-3A0A075B625 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4d-3A0A075B625 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4d-3A0A075B625 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav4d-3A0A075B625 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4d-3A0A075B625 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav4d-3A0A075B625 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4d-3A0A075B625 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4d-3A0A075B625 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4d-3A0A075B625 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4d-3A0A075B625 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Trav4d-3A0A075B625 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav4d-3A0A075B625 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.97■□□□□ 0.15
Trav4d-3A0A075B625 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4d-3A0A075B625 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Trav4d-3A0A075B625 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4d-3A0A075B625 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav4d-3A0A075B625 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Trav4d-3A0A075B625 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav4d-3A0A075B625 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4d-3A0A075B625 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4d-3A0A075B625 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav4d-3A0A075B625 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav4d-3A0A075B625 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4d-3A0A075B625 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4d-3A0A075B625 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4d-3A0A075B625 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav4d-3A0A075B625 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4d-3A0A075B625 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4d-3A0A075B625 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav4d-3A0A075B625 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4d-3A0A075B625 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4d-3A0A075B625 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav4d-3A0A075B625 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4d-3A0A075B625 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4d-3A0A075B625 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4d-3A0A075B625 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav4d-3A0A075B625 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav4d-3A0A075B625 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4d-3A0A075B625 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4d-3A0A075B625 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4d-3A0A075B625 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4d-3A0A075B625 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4d-3A0A075B625 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4d-3A0A075B625 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4d-3A0A075B625 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4d-3A0A075B625 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4d-3A0A075B625 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.88■□□□□ 0.13
Trav4d-3A0A075B625 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Trav4d-3A0A075B625 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4d-3A0A075B625 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav4d-3A0A075B625 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4d-3A0A075B625 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav4d-3A0A075B625 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav4d-3A0A075B625 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4d-3A0A075B625 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4d-3A0A075B625 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4d-3A0A075B625 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4d-3A0A075B625 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4d-3A0A075B625 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4d-3A0A075B625 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4d-3A0A075B625 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4d-3A0A075B625 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Trav4d-3A0A075B625 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4d-3A0A075B625 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4d-3A0A075B625 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4d-3A0A075B625 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trav4d-3A0A075B625 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4d-3A0A075B625 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4d-3A0A075B625 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4d-3A0A075B625 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav4d-3A0A075B625 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4d-3A0A075B625 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4d-3A0A075B625 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav4d-3A0A075B625 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav4d-3A0A075B625 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav4d-3A0A075B625 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav4d-3A0A075B625 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4d-3A0A075B625 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4d-3A0A075B625 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms