Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 AC011447.7-201ENST00000624228 1590 ntBASIC5.33□□□□□ -1.56
SIX4Q9UIU6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SIX4Q9UIU6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AL021331.1-201ENST00000402817 582 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AL357515.1-201ENST00000402967 542 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 GTF2IP5-201ENST00000414608 731 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 FTLP19-201ENST00000433300 394 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RNF2P1-201ENST00000442955 1010 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC112498.1-201ENST00000444401 332 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RPL35AP28-201ENST00000459730 331 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RPL23AP56-201ENST00000460778 453 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RPS3AP41-201ENST00000462701 778 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RPL7P16-201ENST00000479738 738 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC092902.1-201ENST00000486999 259 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC231760.1-201ENST00000498002 260 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 RNU6-415P-201ENST00000516252 97 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC011487.3-201ENST00000593607 453 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AC104687.2-201ENST00000604442 342 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 BNIP3P31-201ENST00000604515 566 ntBASIC5.32□□□□□ -1.56
SIX4Q9UIU6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SIX4Q9UIU6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 MTND4P9-201ENST00000507819 1346 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 CUL4AP1-201ENST00000514750 1863 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 RNU6-1331P-201ENST00000363658 106 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 HMGB3P7-201ENST00000400214 611 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AL445213.1-201ENST00000412589 747 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 COX6B1P1-201ENST00000415962 213 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 QRSL1P2-201ENST00000418582 964 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC073052.1-201ENST00000440417 714 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC000111.2-201ENST00000448200 210 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 RPS3AP53-201ENST00000454716 778 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 NPM1P52-201ENST00000518264 846 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 OR5D15P-201ENST00000531671 942 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 CKS1BP1-201ENST00000555221 240 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC009117.1-201ENST00000563948 554 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 TVP23CP2-201ENST00000571473 623 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 RPAP2P1-201ENST00000603626 1168 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AL391834.2-201ENST00000609982 546 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 AL049794.2-201ENST00000616301 365 ntBASIC5.31□□□□□ -1.56
SIX4Q9UIU6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms