Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 MTND5P23-201ENST00000430812 1655 ntBASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 AC245100.2-201ENST00000454544 1679 ntBASIC4.86□□□□□ -1.63
APOBEC3BQ9UH17 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 TET1P1-201ENST00000426627 2301 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 RNU6-398P-201ENST00000384143 109 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 RPS16P5-201ENST00000406501 404 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 U3.32-201ENST00000408116 212 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 RN7SKP16-201ENST00000410180 299 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 RN7SKP100-201ENST00000411258 284 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC016397.1-201ENST00000412463 242 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 NPM1P40-201ENST00000412758 733 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 FAR2P2-201ENST00000413041 594 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC119751.6-201ENST00000416712 186 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC004074.1-201ENST00000421810 1063 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 FAR2P4-202ENST00000425399 584 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 HMGB1P32-201ENST00000425971 565 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 RPL7AP61-201ENST00000443410 636 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC234781.3-201ENST00000452540 973 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC239798.3-201ENST00000454459 408 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AURKAPS2-201ENST00000454983 333 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 HMGB1P4-201ENST00000455362 567 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AP000942.1-201ENST00000463969 747 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 RN7SL860P-201ENST00000473738 223 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 IGKV1-32-201ENST00000519290 311 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AL512310.9-201ENST00000553311 948 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 Z95331.1-201ENST00000623075 23112 ntBASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOBEC3BQ9UH17 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL022322.2-201ENST00000624072 20397 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AC022417.1-201ENST00000624768 1303 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AC011753.3-201ENST00000443436 406 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AC010733.1-201ENST00000451515 401 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AL513533.1-201ENST00000453728 415 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 NDUFA12P1-201ENST00000455914 406 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 OR5AN2P-201ENST00000534535 896 ntBASIC4.84□□□□□ -1.63
APOBEC3BQ9UH17 AP006289.1-201ENST00000538089 277 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms