Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BLOC1S4Q9NUP1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC004158.1-201ENST00000564508 4319 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC114947.2-201ENST00000565748 2125 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 RNU6-304P-201ENST00000364855 107 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC013442.1-201ENST00000397347 228 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 NCSTNP1-201ENST00000406229 144 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 U3.36-201ENST00000408418 213 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 RNU2-50P-201ENST00000410494 143 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AP000534.2-201ENST00000412729 568 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 COX6CP13-201ENST00000428703 226 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 RHOT1P3-201ENST00000436571 331 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 RPL34P20-201ENST00000442771 351 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 KNOP1P3-201ENST00000446933 426 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC005532.2-201ENST00000467154 373 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC090602.1-201ENST00000469695 252 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC097484.1-201ENST00000471148 389 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SL441P-201ENST00000492388 296 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC025459.1-201ENST00000504072 156 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 MTND3P24-201ENST00000506306 329 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 RNA5SP34-201ENST00000516887 130 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AL450270.1-201ENST00000606160 391 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AL627230.1-201ENST00000613077 211 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 MIR1264-201ENST00000616374 69 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AL591926.8-201ENST00000616876 211 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 LINC01739-205ENST00000641890 573 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 CIR1P2-201ENST00000514821 1342 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 AP000473.2-201ENST00000602659 1537 ntBASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 RPL23P2-201ENST00000320371 421 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 RNU1-106P-201ENST00000384382 164 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 SNORA77-201ENST00000408716 125 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 TATDN1P1-201ENST00000414123 891 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 GTF3AP1-201ENST00000416942 1004 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 HMGB1P4-201ENST00000455362 567 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 NPM1P17-201ENST00000479221 602 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC090114.3-201ENST00000479267 829 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC008410.1-201ENST00000483777 339 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC004825.1-201ENST00000555068 586 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AL359219.2-201ENST00000555184 348 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC068714.1-201ENST00000559623 800 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC127024.5-201ENST00000580085 462 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC011447.4-201ENST00000587562 111 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 TAS2R6P-201ENST00000605022 826 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 MIR6826-201ENST00000617808 98 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms