Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC008549.2-201ENST00000333482 706 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AL078599.1-201ENST00000402075 293 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 SNORA11.2-201ENST00000408318 127 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC234779.1-201ENST00000425910 285 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AL451139.1-201ENST00000434718 346 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 RPL35AP21-201ENST00000437667 333 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AL591473.1-201ENST00000464297 313 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 DEFB109A-201ENST00000482450 265 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 PPM1AP1-201ENST00000502740 1135 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC133555.2-201ENST00000550213 292 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 RN7SL690P-201ENST00000582087 240 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 AC068790.7-201ENST00000602347 528 ntBASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM3Q8TF72 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 SNORA48.7-201ENST00000391302 135 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL021331.1-201ENST00000402817 582 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 RNA5SP113-201ENST00000410486 84 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 RPS17P8-201ENST00000434525 335 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 CYCSP42-201ENST00000450823 238 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC073358.1-201ENST00000505671 684 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL034374.2-201ENST00000605281 548 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL049794.2-201ENST00000616301 365 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC132825.1-201ENST00000463573 2247 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 SDAD1P1-202ENST00000524156 2051 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL121950.1-201ENST00000624993 2077 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 ATP5HP3-201ENST00000396994 486 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 RN7SKP100-201ENST00000411258 284 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC092570.3-201ENST00000420113 693 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC083829.1-201ENST00000503756 657 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC009643.1-201ENST00000532030 391 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 RPL26P30-202ENST00000602923 645 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AL133338.2-201ENST00000604292 736 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 AC019193.2-201ENST00000610012 634 ntBASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM3Q8TF72 MFSD8-220ENST00000641243 1422 ntBASIC4.9□□□□□ -1.62
SHROOM3Q8TF72 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.9□□□□□ -1.62
SHROOM3Q8TF72 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHROOM3Q8TF72 SMG1P6-201ENST00000532337 2930 ntBASIC4.9□□□□□ -1.62
SHROOM3Q8TF72 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 AC006946.1-201ENST00000429106 328 ntBASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 RHEBP2-201ENST00000450289 600 ntBASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 RPL7P32-201ENST00000457119 744 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms