Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 SNORA17.1-201ENST00000362945 126 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 RNA5SP223-201ENST00000365174 120 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 MT-RNR1-201ENST00000389680 954 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 RPA2P2-201ENST00000419698 796 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC006466.1-201ENST00000438721 289 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 GAPDHP25-201ENST00000447061 1001 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 MRPL35P2-201ENST00000448009 511 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AL591363.1-201ENST00000450091 483 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC079168.1-201ENST00000458741 345 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 RN7SL423P-201ENST00000486202 304 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 RN7SL346P-201ENST00000491561 294 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC108043.1-201ENST00000512696 574 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 RNA5SP373-201ENST00000517271 95 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC092490.3-201ENST00000545370 572 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 SNRPGP1-201ENST00000553864 222 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC009597.2-201ENST00000604659 592 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 KATNBL1P1-201ENST00000605192 748 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 MIR6820-201ENST00000611508 62 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 AC090527.3-201ENST00000619041 548 ntBASIC4.75□□□□□ -1.65
CCDC71Q8IV32 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC71Q8IV32 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AL356968.2-201ENST00000412769 1257 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RPL36AP10-201ENST00000421785 322 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC104634.1-201ENST00000452720 462 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 HIGD1AP8-201ENST00000453927 274 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AL356981.1-201ENST00000454879 684 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RNA5SP103-201ENST00000459503 118 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC004980.4-201ENST00000513375 203 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RNA5SP303-201ENST00000516192 130 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RNA5SP228-201ENST00000516232 133 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RNA5SP464-201ENST00000516251 108 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC104997.1-201ENST00000519761 717 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 HIGD1AP5-201ENST00000529959 259 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 BNIP3P1-201ENST00000547295 580 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 MIR4480-201ENST00000582492 71 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC099494.2-201ENST00000623371 978 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AL353662.3-201ENST00000625131 237 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 AC083843.3-201ENST00000623679 2186 ntBASIC4.74□□□□□ -1.65
CCDC71Q8IV32 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC71Q8IV32 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 AC011503.2-201ENST00000594230 1500 ntBASIC4.73□□□□□ -1.65
CCDC71Q8IV32 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 MTHFD2P5-201ENST00000320415 844 ntBASIC4.73□□□□□ -1.65
CCDC71Q8IV32 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 AL353625.1-202ENST00000366273 571 ntBASIC4.73□□□□□ -1.65
CCDC71Q8IV32 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC71Q8IV32 AL035079.1-201ENST00000405210 287 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms