Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 AC005832.3-201ENST00000537929 631 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.73□□□□□ -1.33
SOX4Q06945 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SOX4Q06945 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 CYCSP38-201ENST00000559840 322 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.73□□□□□ -1.33
SOX4Q06945 AC006504.3-201ENST00000586818 523 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.73□□□□□ -1.33
SOX4Q06945 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 AP001823.1-201ENST00000604056 1003 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 RFPL4AP6-201ENST00000616792 846 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 AL512652.1-201ENST00000619006 500 ntBASIC6.73□□□□□ -1.33
SOX4Q06945 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX4Q06945 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
SOX4Q06945 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX4Q06945 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX4Q06945 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX4Q06945 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC105749.1-201ENST00000631338 2008 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 BRAFP1-201ENST00000445336 2703 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 QRSL1P1-201ENST00000400977 1540 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 BIN2P1-201ENST00000504996 1530 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 RN7SKP15-201ENST00000364742 309 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SOX4Q06945 CIR1P3-201ENST00000405137 479 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 YWHAEP5-201ENST00000431545 765 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 BTF3P10-201ENST00000433415 495 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC234064.1-201ENST00000436312 247 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 PPIAP10-201ENST00000438675 458 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC023512.1-201ENST00000444513 499 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 VN1R38P-201ENST00000450265 887 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC098824.1-201ENST00000453565 980 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 AL672167.3-201ENST00000465951 960 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC146507.1-201ENST00000468335 354 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 MTND6P6-201ENST00000478031 263 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC010343.2-201ENST00000510162 224 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 Y_RNA.710-201ENST00000516975 110 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 YWHABP2-201ENST00000540201 713 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC233702.7-202ENST00000582941 211 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC027229.1-201ENST00000583887 253 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC068768.2-201ENST00000602352 343 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AL365503.1-201ENST00000605247 905 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC092681.3-201ENST00000609463 678 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 AC092266.1-201ENST00000610958 165 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.72□□□□□ -1.33
SOX4Q06945 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.72□□□□□ -1.33
SOX4Q06945 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX4Q06945 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX4Q06945 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SOX4Q06945 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms