Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC096644.3-201ENST00000416788 338 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.52□□□□□ -1.37
SNRPA1P09661 AC009238.2-201ENST00000431026 355 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.52□□□□□ -1.37
SNRPA1P09661 RPL19P16-201ENST00000433839 588 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.52□□□□□ -1.37
SNRPA1P09661 AC006326.1-201ENST00000445465 787 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AC104982.1-201ENST00000478775 574 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 LARP7P4-201ENST00000481075 878 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.52□□□□□ -1.37
SNRPA1P09661 IMPA1P1-201ENST00000510718 842 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 HMGB1P47-201ENST00000511281 589 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 OR7H2P-201ENST00000513483 306 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.52□□□□□ -1.37
SNRPA1P09661 AC103833.1-201ENST00000517442 172 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.52□□□□□ -1.37
SNRPA1P09661 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.52□□□□□ -1.37
SNRPA1P09661 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.52□□□□□ -1.37
SNRPA1P09661 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.52□□□□□ -1.37
SNRPA1P09661 LRRC34P1-201ENST00000542742 915 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.52□□□□□ -1.37
SNRPA1P09661 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.52□□□□□ -1.37
SNRPA1P09661 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNRPA1P09661 AC007786.3-201ENST00000615154 596 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AC025016.1-201ENST00000616746 682 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AL078595.3-201ENST00000623815 1166 ntBASIC6.52□□□□□ -1.37
SNRPA1P09661 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.52□□□□□ -1.37
SNRPA1P09661 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.52□□□□□ -1.37
SNRPA1P09661 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.52□□□□□ -1.37
SNRPA1P09661 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.52□□□□□ -1.37
SNRPA1P09661 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SNRPA1P09661 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SNRPA1P09661 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.52□□□□□ -1.37
SNRPA1P09661 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNRPA1P09661 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNRPA1P09661 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNRPA1P09661 MTCO1P15-201ENST00000529569 1526 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNRPA1P09661 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNRPA1P09661 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNRPA1P09661 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 SNORA70.6-201ENST00000383934 134 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 HSPD1P12-201ENST00000429127 1069 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 CEACAMP9-201ENST00000442990 513 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 ELOCP13-201ENST00000443934 329 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 AC099063.2-201ENST00000446360 662 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 OR52J1P-201ENST00000450596 932 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 MTND2P6-201ENST00000455337 1030 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 snoU109.3-201ENST00000459477 145 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 AC135999.1-201ENST00000478962 479 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 AC021193.1-201ENST00000511607 420 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 AC092593.2-201ENST00000513866 913 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC063949.1-201ENST00000552900 865 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.51□□□□□ -1.37
SNRPA1P09661 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AC087283.1-201ENST00000604029 1074 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 AC138907.10-201ENST00000623708 983 ntBASIC6.51□□□□□ -1.37
SNRPA1P09661 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.51□□□□□ -1.37
SNRPA1P09661 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNRPA1P09661 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SNRPA1P09661 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SNRPA1P09661 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.51□□□□□ -1.37
SNRPA1P09661 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SNRPA1P09661 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.5□□□□□ -1.37
SNRPA1P09661 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNRPA1P09661 RNA5SP223-201ENST00000365174 120 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 SNORA2.3-201ENST00000383920 135 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 SNORA48.4-201ENST00000391089 134 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AL158827.1-201ENST00000416300 391 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.5□□□□□ -1.37
SNRPA1P09661 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.5□□□□□ -1.37
SNRPA1P09661 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.5□□□□□ -1.37
SNRPA1P09661 AL512661.1-201ENST00000434586 1253 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 TCEA1P1-201ENST00000449716 880 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 MTND2P8-201ENST00000450555 1025 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.5□□□□□ -1.37
SNRPA1P09661 RPS29P33-201ENST00000456717 146 ntBASIC6.5□□□□□ -1.37
SNRPA1P09661 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms