Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL583832.1-201ENST00000603227 784 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL121890.3-201ENST00000618494 516 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC099654.13-201ENST00000639774 207 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 MIR193BHG-214ENST00000641765 509 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC068870.1-201ENST00000563737 2455 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 BX005019.1-201ENST00000561881 1810 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK3Q8IV63 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
VRK3Q8IV63 AC015689.2-201ENST00000528172 1738 ntBASIC5.57□□□□□ -1.52
VRK3Q8IV63 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL161912.4-201ENST00000623889 2468 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 PWAR1-201ENST00000624188 2414 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 RN7SKP15-201ENST00000364742 309 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 RNU1-136P-201ENST00000384181 164 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 Y_RNA.472-201ENST00000384322 102 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 TRAV35-201ENST00000390462 330 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 MTND4P3-201ENST00000417829 541 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC093155.2-201ENST00000420734 937 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL662874.1-201ENST00000426065 230 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 MTND6P12-201ENST00000428247 522 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 MTATP6P23-201ENST00000440153 476 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 EEF1A1P39-201ENST00000440791 250 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 OTX2P1-201ENST00000450956 354 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC234781.3-201ENST00000452540 973 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 MEMO1P4-201ENST00000453590 386 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC117394.1-201ENST00000477323 567 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC079203.1-201ENST00000487972 404 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 MTATP6P1-201ENST00000514057 681 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC006518.2-201ENST00000542513 940 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC137627.1-201ENST00000545761 289 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC087897.1-201ENST00000550134 156 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC079600.1-201ENST00000550326 297 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC090695.1-201ENST00000561269 1222 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AGGF1P4-201ENST00000568249 801 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 BNIP3P30-201ENST00000601184 574 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC125494.2-201ENST00000602431 657 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC093765.1-201ENST00000603758 881 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC068944.2-201ENST00000610373 403 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC010975.3-201ENST00000618727 978 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms