Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK3Q00526 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK3Q00526 MIR1264-201ENST00000616374 69 ntBASIC5.06□□□□□ -1.6
CDK3Q00526 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK3Q00526 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.06□□□□□ -1.6
CDK3Q00526 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK3Q00526 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK3Q00526 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK3Q00526 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK3Q00526 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK3Q00526 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK3Q00526 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK3Q00526 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK3Q00526 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK3Q00526 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK3Q00526 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDK3Q00526 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDK3Q00526 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 RNU6-729P-201ENST00000384399 107 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 RPS27AP6-201ENST00000427962 448 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 VN1R54P-201ENST00000435210 1049 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 RHOT1P3-201ENST00000436571 331 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK3Q00526 RPL34P20-201ENST00000442771 351 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC092691.2-201ENST00000461787 803 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 RN7SL443P-201ENST00000464331 290 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 AC107015.1-201ENST00000466902 747 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 RPSAP51-201ENST00000497462 645 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 NDUFB5P1-201ENST00000508134 564 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 COX6B1P5-201ENST00000509843 249 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 VTA1P2-201ENST00000520205 911 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 OSBPL9P3-201ENST00000534523 595 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK3Q00526 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.05□□□□□ -1.6
CDK3Q00526 EIF3FP1-201ENST00000613970 806 ntBASIC5.05□□□□□ -1.6
CDK3Q00526 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK3Q00526 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK3Q00526 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDK3Q00526 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK3Q00526 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK3Q00526 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK3Q00526 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK3Q00526 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK3Q00526 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK3Q00526 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK3Q00526 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK3Q00526 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDK3Q00526 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDK3Q00526 RN7SKP104-201ENST00000362605 328 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 RNU6-650P-201ENST00000365658 111 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 SNORA66-201ENST00000384792 133 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 AL390316.1-201ENST00000406279 553 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK3Q00526 RPL23AP4-201ENST00000427757 463 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 AC009238.2-201ENST00000431026 355 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK3Q00526 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK3Q00526 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK3Q00526 GAPDHP14-201ENST00000450472 937 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 RN7SL244P-201ENST00000493405 297 ntBASIC5.04□□□□□ -1.6
CDK3Q00526 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK3Q00526 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK3Q00526 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms