Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CLRN1P58418 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CLRN1P58418 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 FUNDC2P3-201ENST00000334716 533 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 RNU1-134P-201ENST00000362935 165 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 SNORD1C-201ENST00000363315 78 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 RNU1-59P-201ENST00000364829 162 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 AL096829.1-201ENST00000413677 457 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CLRN1P58418 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 AC245884.2-201ENST00000426257 404 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AP001324.1-201ENST00000428553 399 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC108479.1-201ENST00000431142 427 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 ZNF619P1-201ENST00000446539 752 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 TPMTP4-201ENST00000450749 678 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC016027.4-201ENST00000450866 277 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 CCDC75P1-201ENST00000469247 791 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC098818.1-201ENST00000478593 252 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 GAPDHP39-201ENST00000481866 979 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC107401.1-201ENST00000503426 685 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.39□□□□□ -1.55
CLRN1P58418 DSTNP2-201ENST00000504533 515 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.39□□□□□ -1.55
CLRN1P58418 AC079395.1-201ENST00000510981 262 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 HNRNPKP5-201ENST00000515300 253 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 RNU6-416P-201ENST00000516265 103 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLRN1P58418 IGJP1-201ENST00000522682 475 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 OR5AZ1P-201ENST00000527448 943 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 OR4C2P-201ENST00000530855 1064 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AP002812.4-201ENST00000532139 286 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC036111.2-201ENST00000533247 901 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC022880.1-201ENST00000534017 973 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC092851.1-201ENST00000535964 478 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.39□□□□□ -1.55
CLRN1P58418 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.39□□□□□ -1.55
CLRN1P58418 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.39□□□□□ -1.55
CLRN1P58418 AC121758.1-202ENST00000556917 658 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.39□□□□□ -1.55
CLRN1P58418 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.39□□□□□ -1.55
CLRN1P58418 AGGF1P4-201ENST00000568249 801 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.39□□□□□ -1.55
CLRN1P58418 EIF1P6-201ENST00000600054 334 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.39□□□□□ -1.55
CLRN1P58418 AC011453.2-201ENST00000603737 729 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC131235.4-201ENST00000609288 620 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AL136097.3-201ENST00000611097 505 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 U1.25-201ENST00000614085 162 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 FAM27E2-201ENST00000619668 403 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 U1.31-201ENST00000620022 160 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC092656.1-203ENST00000624134 423 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC116618.1-201ENST00000634617 774 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLRN1P58418 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLRN1P58418 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 AL356473.1-201ENST00000406203 1408 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC106872.5-201ENST00000508856 1416 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 AC093536.2-201ENST00000565257 1406 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 ZNF833P-201ENST00000424938 1494 ntBASIC5.39□□□□□ -1.55
CLRN1P58418 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLRN1P58418 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CLRN1P58418 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CLRN1P58418 AC012078.1-201ENST00000405035 1646 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
CLRN1P58418 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLRN1P58418 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLRN1P58418 SNORA21-201ENST00000362423 132 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 RNU6-931P-201ENST00000363850 107 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 OR5H15-201ENST00000383696 930 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 SNORA70.9-201ENST00000384370 135 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 MT-TH-201ENST00000387441 69 ntBASIC5.38□□□□□ -1.55
CLRN1P58418 MIR320B1-201ENST00000390209 79 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms