Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CR1P49238 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CX3CR1P49238 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CR1P49238 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CR1P49238 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CR1P49238 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CX3CR1P49238 UGT2B26P-201ENST00000508672 1613 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CX3CR1P49238 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CR1P49238 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CR1P49238 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CR1P49238 SNORA66-201ENST00000384792 133 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 AL512422.1-201ENST00000407033 553 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CR1P49238 AC073052.1-201ENST00000440417 714 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 AL450023.3-201ENST00000440592 271 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 AC245047.2-201ENST00000441060 530 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CR1P49238 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CR1P49238 AL606490.1-201ENST00000452266 765 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 HMGB1P4-201ENST00000455362 567 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CR1P49238 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CR1P49238 AC090686.1-201ENST00000481577 749 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 RNU6-319P-201ENST00000516025 108 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 RPL23AP53-201ENST00000521854 457 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.37□□□□□ -1.71
CX3CR1P49238 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CR1P49238 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CR1P49238 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.37□□□□□ -1.71
CX3CR1P49238 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.37□□□□□ -1.71
CX3CR1P49238 AC138473.1-201ENST00000605717 526 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 SNORD91B-202ENST00000608459 222 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 AP002967.1-201ENST00000624203 539 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.37□□□□□ -1.71
CX3CR1P49238 TMEM30CP-203ENST00000637814 1035 ntBASIC4.37□□□□□ -1.71
CX3CR1P49238 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CX3CR1P49238 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CX3CR1P49238 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CX3CR1P49238 AC107068.1-201ENST00000563286 4218 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 AC083843.3-201ENST00000623679 2186 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CX3CR1P49238 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CR1P49238 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CX3CR1P49238 QRSL1P2-201ENST00000418582 964 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 MTCYBP7-201ENST00000419540 1134 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 DDX39BP1-205ENST00000422507 192 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 RPL23AP4-201ENST00000427757 463 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 MTND2P2-201ENST00000434633 945 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 AL589765.3-201ENST00000446084 462 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 TCEA1P1-201ENST00000449716 880 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AL445433.1-201ENST00000457507 257 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 RN7SL101P-201ENST00000496350 279 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AK4P6-201ENST00000505168 528 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.36□□□□□ -1.71
CX3CR1P49238 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 RPL7L1P4-201ENST00000513004 707 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 ATP5LP3-201ENST00000514223 304 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AC027308.1-201ENST00000517993 110 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CR1P49238 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CR1P49238 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 AC004825.1-201ENST00000555068 586 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.36□□□□□ -1.71
CX3CR1P49238 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.36□□□□□ -1.71
CX3CR1P49238 EIF1P5-201ENST00000585002 234 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 RNF138P2-201ENST00000603490 592 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AP000864.1-201ENST00000609424 650 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 AC117490.2-201ENST00000610042 594 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 AC139713.2-215ENST00000641428 5037 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.36□□□□□ -1.71
CX3CR1P49238 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms