Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HOXC6P09630 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC6P09630 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC6P09630 AL132640.2-201ENST00000559968 1698 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 AL592494.2-201ENST00000425455 1548 ntBASIC5.69□□□□□ -1.5
HOXC6P09630 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC6P09630 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
HOXC6P09630 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC6P09630 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 SNORA2.3-201ENST00000383920 135 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 RNU6-883P-201ENST00000384597 107 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AL607077.1-201ENST00000401718 499 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC069213.2-201ENST00000420238 366 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC6P09630 MTND4LP7-201ENST00000431728 294 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 NRBF2P3-201ENST00000432731 865 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 Z85994.2-201ENST00000434327 452 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC005154.2-201ENST00000438110 379 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC004980.3-201ENST00000447046 365 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC6P09630 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC6P09630 SEPT7P6-201ENST00000469999 1143 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC068587.1-201ENST00000483613 781 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 RPSAP51-201ENST00000497462 645 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC111000.3-201ENST00000508057 576 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC021193.1-201ENST00000511607 420 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 ENPP7P9-201ENST00000514456 627 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 RN7SKP276-201ENST00000516242 268 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXC6P09630 AP003080.1-202ENST00000526526 915 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 GTF2IP11-201ENST00000526931 420 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 MTND5P21-201ENST00000531961 522 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AP001880.2-201ENST00000538233 448 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 TVP23CP2-201ENST00000571473 623 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 EIF1P5-201ENST00000585002 234 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 AC011453.2-201ENST00000603737 729 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.68□□□□□ -1.5
HOXC6P09630 AL162233.1-201ENST00000620014 944 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 MIR6839-201ENST00000620425 113 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 AC009269.6-201ENST00000621778 588 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 AL136520.1-201ENST00000600311 1322 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 MAPK10-328ENST00000641553 4009 ntBASIC5.68□□□□□ -1.5
HOXC6P09630 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC6P09630 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC6P09630 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC6P09630 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 DHX40P1-201ENST00000588725 1412 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC6P09630 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HOXC6P09630 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXC6P09630 P2RY10P2-201ENST00000416730 913 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 CNOT7P1-201ENST00000429006 852 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC6P09630 AL161722.1-201ENST00000446972 1032 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC6P09630 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC6P09630 MTCYBP14-201ENST00000457471 715 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 HMGN1P8-201ENST00000463578 288 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AC128716.1-201ENST00000475129 166 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
HOXC6P09630 AC026979.1-201ENST00000492525 396 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC6P09630 AC093720.1-201ENST00000505681 714 ntBASIC5.67□□□□□ -1.5
HOXC6P09630 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC6P09630 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC6P09630 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC6P09630 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms