Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL110118.1-201ENST00000553543 400 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC091042.1-201ENST00000579213 173 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 MIR6853-201ENST00000619642 74 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC011815.3-201ENST00000624194 473 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC012078.1-201ENST00000405035 1646 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC010928.1-201ENST00000592477 1447 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC097063.1-201ENST00000426714 1797 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AL731566.1-201ENST00000620490 1937 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AL031119.1-201ENST00000404707 1879 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC083843.2-201ENST00000568248 6253 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AL360081.1-201ENST00000428299 555 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 LYPLA1P1-201ENST00000434514 622 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 RPL36AP15-201ENST00000444514 266 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC104651.2-201ENST00000447549 528 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC108463.1-201ENST00000450258 347 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC023424.1-201ENST00000496058 459 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC025164.1-201ENST00000496249 478 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC098935.2-201ENST00000604222 466 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AL359757.1-201ENST00000623176 255 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AP000542.2-201ENST00000623199 6179 ntBASIC4.77□□□□□ -1.65
HLA-DQB2P05538 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB2P05538 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AL590240.1-201ENST00000334118 313 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 NACAP7-201ENST00000407371 609 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 EIF4A1P1-201ENST00000420241 934 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC016831.4-201ENST00000438302 307 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC073648.4-201ENST00000442655 781 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AL031584.1-201ENST00000447169 754 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AL591473.1-201ENST00000464297 313 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC090142.1-201ENST00000465776 462 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC015912.2-201ENST00000571053 181 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 RN7SL652P-201ENST00000577769 300 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC130352.1-201ENST00000602979 661 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 IMMP1LP1-201ENST00000605170 488 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 RBPJP2-201ENST00000618187 1444 ntBASIC4.76□□□□□ -1.65
HLA-DQB2P05538 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQB2P05538 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC140479.3-201ENST00000418944 1126 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 FABP7P2-201ENST00000429946 379 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 RPS27P18-201ENST00000431701 247 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 RPL12P18-201ENST00000437175 325 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms