Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN9O95484 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN9O95484 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN9O95484 RPL23P2-201ENST00000320371 421 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLDN9O95484 SETP15-201ENST00000412724 337 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 AF186996.5-201ENST00000418098 904 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 OR6C64P-201ENST00000419708 825 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 RCC2P2-201ENST00000422174 918 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 AL137845.2-201ENST00000444292 988 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 AL163193.1-201ENST00000444895 788 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN9O95484 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN9O95484 AC090114.3-201ENST00000479267 829 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 RN7SL319P-201ENST00000480656 221 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 RN7SL97P-201ENST00000486780 299 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 RNA5SP92-201ENST00000516437 110 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 IGLV2-28-201ENST00000520681 304 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN9O95484 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 AC018552.1-201ENST00000562099 811 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN9O95484 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN9O95484 AL021707.7-201ENST00000607991 416 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 BNIP3P41-202ENST00000616656 861 ntBASIC4.75□□□□□ -1.65
CLDN9O95484 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN9O95484 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLDN9O95484 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN9O95484 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN9O95484 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN9O95484 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN9O95484 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN9O95484 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN9O95484 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN9O95484 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN9O95484 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN9O95484 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 CASC19-206ENST00000641028 1430 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
CLDN9O95484 RNA5SP428-201ENST00000365129 132 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AL021331.1-201ENST00000402817 582 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 RPL36AP10-201ENST00000421785 322 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 EIF4HP2-201ENST00000424380 563 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 CKS1BP6-201ENST00000424932 240 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN9O95484 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN9O95484 MYO5BP2-201ENST00000449815 1277 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 OR5M14P-201ENST00000506803 618 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN9O95484 AC108043.1-201ENST00000512696 574 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN9O95484 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN9O95484 OR10D4P-201ENST00000525892 951 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN9O95484 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN9O95484 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN9O95484 AC084033.1-201ENST00000550830 633 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN9O95484 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLDN9O95484 SNORA74C-1-201ENST00000580726 201 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 MIR4691-201ENST00000583764 85 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN9O95484 SUMO2P15-201ENST00000604285 278 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AC093799.2-201ENST00000610062 578 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AC012414.7-202ENST00000622705 1090 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 AL353662.3-201ENST00000625131 237 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN9O95484 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLDN9O95484 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN9O95484 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 AC008758.3-201ENST00000507003 1829 ntBASIC4.74□□□□□ -1.65
CLDN9O95484 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN9O95484 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN9O95484 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLDN9O95484 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms