Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 OR10J6P-201ENST00000289731 930 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 OR4G2P-201ENST00000328113 903 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RNU6-666P-201ENST00000363499 107 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RN7SKP250-201ENST00000363924 321 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RNU6-694P-201ENST00000364071 147 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RNU6-532P-201ENST00000384318 107 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC003045.1-201ENST00000398779 713 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 PSMA6P1-201ENST00000400275 741 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RPL7P58-201ENST00000402913 758 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 MTCO3P31-201ENST00000405526 789 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RPS3AP24-201ENST00000407896 734 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RN7SKP281-201ENST00000410472 352 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RPL21P108-201ENST00000413857 481 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RPS7P13-201ENST00000413955 498 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 IPMKP1-201ENST00000425988 855 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 COX6CP12-201ENST00000446748 202 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC005165.2-201ENST00000466070 380 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC104687.1-201ENST00000485829 412 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC111193.1-201ENST00000504097 155 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC093816.1-201ENST00000515076 913 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RNA5SP418-201ENST00000515951 117 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC109635.6-201ENST00000525487 1113 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AL133399.1-201ENST00000527476 298 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC084757.1-201ENST00000559987 490 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 VN1R92P-201ENST00000598511 928 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC097467.4-201ENST00000605504 141 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC017083.3-201ENST00000609955 700 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC138932.5-201ENST00000617759 563 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC005840.5-201ENST00000619166 599 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AP000547.3-204ENST00000588548 2523 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC005332.9-201ENST00000620266 2921 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 FGF7P2-201ENST00000332473 296 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RNA5SP188-201ENST00000362916 129 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RNU4-7P-201ENST00000364758 141 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RNA5SP77-201ENST00000365394 120 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RNU6-98P-201ENST00000384173 107 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RNU6-1263P-201ENST00000384601 106 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 OR6C69P-201ENST00000394268 893 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 SNORA11C-201ENST00000408532 129 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 RNA5SP498-201ENST00000411342 120 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 ATG4AP1-201ENST00000416893 538 ntBASIC6.05□□□□□ -1.44
PTCHD1Q96NR3 THEM7P-201ENST00000419556 672 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms