Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 RN7SKP153-201ENST00000365026 316 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 SNORA68.2-201ENST00000391263 128 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 OR7E156P-201ENST00000400303 464 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AL035458.1-201ENST00000433096 585 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 GSTM5P1-201ENST00000434751 660 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AL353597.2-202ENST00000434901 373 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 YWHAZP2-201ENST00000440317 728 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 LRRC37A14P-201ENST00000452297 462 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 RPL23AP73-201ENST00000492507 471 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC010468.3-201ENST00000508225 458 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC025768.1-201ENST00000510057 267 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 SNORA31.13-201ENST00000516624 135 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 SCARNA16.4-201ENST00000516956 187 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC025918.2-201ENST00000558683 763 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 RBM22P12-201ENST00000567098 1255 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC067773.1-201ENST00000603284 1094 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC011626.1-201ENST00000604710 562 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC090525.3-201ENST00000605601 189 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC116447.1-201ENST00000613153 453 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC015908.5-201ENST00000623289 343 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AC010435.1-201ENST00000623353 1177 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AP001962.1-201ENST00000624114 559 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 LINC01963-201ENST00000562038 3148 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL451142.2-201ENST00000429076 2090 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 SNORA62.2-201ENST00000364672 152 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 MIR589-201ENST00000385238 99 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 RN7SKP16-201ENST00000410180 299 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC013404.1-201ENST00000413068 249 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 TATDN1P1-201ENST00000414123 891 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 XKRYP4-201ENST00000414395 483 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 SRSF1P1-201ENST00000424058 520 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC092447.2-201ENST00000435487 669 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 FMO7P-201ENST00000436045 768 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC074367.1-201ENST00000438685 1125 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 DNAJA1P5-201ENST00000440278 943 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 EEF1B2P6-201ENST00000445713 673 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL589765.3-201ENST00000446084 462 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 XKRYP5-201ENST00000449659 483 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL672138.1-201ENST00000450604 1015 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 RPS20P4-201ENST00000461659 355 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 PSMA6P4-201ENST00000603247 718 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC108865.2-201ENST00000606881 432 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms