Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MTND2P13-201ENST00000577438 1039 ntBASIC5.04□□□□□ -1.6
CBX1P83916 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.04□□□□□ -1.6
CBX1P83916 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.04□□□□□ -1.6
CBX1P83916 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.04□□□□□ -1.6
CBX1P83916 AC092266.1-201ENST00000610958 165 ntBASIC5.04□□□□□ -1.6
CBX1P83916 AL353726.1-201ENST00000614041 1000 ntBASIC5.04□□□□□ -1.6
CBX1P83916 AC006840.1-201ENST00000623069 542 ntBASIC5.04□□□□□ -1.6
CBX1P83916 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.04□□□□□ -1.6
CBX1P83916 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.04□□□□□ -1.6
CBX1P83916 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.04□□□□□ -1.6
CBX1P83916 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CBX1P83916 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.04□□□□□ -1.6
CBX1P83916 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.04□□□□□ -1.6
CBX1P83916 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX1P83916 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX1P83916 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX1P83916 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
CBX1P83916 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CBX1P83916 OR4K12P-201ENST00000406538 961 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX1P83916 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX1P83916 MTND2P11-201ENST00000423638 648 ntBASIC5.03□□□□□ -1.6
CBX1P83916 HMGB3P24-201ENST00000433260 622 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CBX1P83916 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX1P83916 ATP5LP2-201ENST00000440646 311 ntBASIC5.03□□□□□ -1.6
CBX1P83916 RPL5P7-201ENST00000444235 813 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX1P83916 RPL23AP65-201ENST00000475608 468 ntBASIC5.03□□□□□ -1.6
CBX1P83916 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CBX1P83916 GUSBP9-201ENST00000510138 584 ntBASIC5.03□□□□□ -1.6
CBX1P83916 RNA5SP497-201ENST00000516081 97 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AC011853.1-201ENST00000518911 454 ntBASIC5.03□□□□□ -1.6
CBX1P83916 IFITM8P-201ENST00000522529 394 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX1P83916 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CBX1P83916 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX1P83916 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX1P83916 AC018552.1-201ENST00000562099 811 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AC122134.1-201ENST00000565664 1104 ntBASIC5.03□□□□□ -1.6
CBX1P83916 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.03□□□□□ -1.6
CBX1P83916 MIR4675-201ENST00000577898 77 ntBASIC5.03□□□□□ -1.6
CBX1P83916 ARGFXP2-201ENST00000579304 949 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AC134669.1-201ENST00000581275 672 ntBASIC5.03□□□□□ -1.6
CBX1P83916 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.03□□□□□ -1.6
CBX1P83916 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX1P83916 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.03□□□□□ -1.6
CBX1P83916 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.03□□□□□ -1.6
CBX1P83916 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.03□□□□□ -1.6
CBX1P83916 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CBX1P83916 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX1P83916 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CBX1P83916 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX1P83916 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.02□□□□□ -1.61
CBX1P83916 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
CBX1P83916 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CBX1P83916 RNA5SP90-201ENST00000364801 99 ntBASIC5.02□□□□□ -1.61
CBX1P83916 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX1P83916 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CBX1P83916 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CBX1P83916 AL391219.1-201ENST00000422570 483 ntBASIC5.02□□□□□ -1.61
CBX1P83916 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX1P83916 YWHAEP5-201ENST00000431545 765 ntBASIC5.02□□□□□ -1.61
CBX1P83916 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CBX1P83916 Z84478.1-201ENST00000438230 1219 ntBASIC5.02□□□□□ -1.61
CBX1P83916 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.02□□□□□ -1.61
CBX1P83916 AC105918.1-201ENST00000474399 838 ntBASIC5.02□□□□□ -1.61
CBX1P83916 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX1P83916 AC022215.1-201ENST00000481770 362 ntBASIC5.02□□□□□ -1.61
CBX1P83916 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX1P83916 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.02□□□□□ -1.61
CBX1P83916 MRPS16P1-201ENST00000523462 412 ntBASIC5.02□□□□□ -1.61
CBX1P83916 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX1P83916 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CBX1P83916 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX1P83916 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.02□□□□□ -1.61
CBX1P83916 AL135786.2-201ENST00000608422 615 ntBASIC5.02□□□□□ -1.61
CBX1P83916 MIR4727-201ENST00000622232 55 ntBASIC5.02□□□□□ -1.61
CBX1P83916 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.02□□□□□ -1.61
CBX1P83916 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
CBX1P83916 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.02□□□□□ -1.61
CBX1P83916 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CBX1P83916 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CBX1P83916 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CBX1P83916 ZNF962P-201ENST00000443465 3140 ntBASIC5.01□□□□□ -1.61
CBX1P83916 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CBX1P83916 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CBX1P83916 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CBX1P83916 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CBX1P83916 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CBX1P83916 RNA5SP131-201ENST00000365452 119 ntBASIC5.01□□□□□ -1.61
CBX1P83916 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CBX1P83916 SRSF1P1-201ENST00000424058 520 ntBASIC5.01□□□□□ -1.61
CBX1P83916 AL022331.1-201ENST00000429025 477 ntBASIC5.01□□□□□ -1.61
CBX1P83916 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.01□□□□□ -1.61
CBX1P83916 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.01□□□□□ -1.61
CBX1P83916 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.01□□□□□ -1.61
CBX1P83916 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CBX1P83916 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.01□□□□□ -1.61
CBX1P83916 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms