Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
CLDN6P56747 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 MUC2-202ENST00000613187 4845 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLDN6P56747 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN6P56747 AC079298.1-201ENST00000625026 1619 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN6P56747 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.79□□□□□ -1.64
CLDN6P56747 RNU4-39P-201ENST00000362455 127 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 RNU1-74P-201ENST00000384108 171 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 PEX12P1-201ENST00000400284 1048 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AL358178.1-201ENST00000407698 397 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 MIR1193-201ENST00000408109 78 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 SNORA77-201ENST00000408716 125 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 GTF2IP5-201ENST00000414608 731 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AC005154.2-201ENST00000438110 379 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 MTCYBP21-201ENST00000443300 1113 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 VN1R96P-201ENST00000446052 858 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AL354714.3-201ENST00000447284 493 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN6P56747 NUTF2P7-201ENST00000453086 375 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 OR52A4P-201ENST00000472867 958 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 OR11I1P-201ENST00000486033 954 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AC097173.1-201ENST00000505862 819 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN6P56747 AC138832.1-201ENST00000522871 556 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 SOX5P1-201ENST00000524155 1127 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CLDN6P56747 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN6P56747 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN6P56747 AC136624.4-201ENST00000573044 370 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN6P56747 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN6P56747 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN6P56747 AC093765.1-201ENST00000603758 881 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AC087468.1-201ENST00000604365 630 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 AL356608.1-201ENST00000610034 820 ntBASIC4.79□□□□□ -1.64
CLDN6P56747 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN6P56747 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CLDN6P56747 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN6P56747 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN6P56747 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN6P56747 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN6P56747 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN6P56747 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN6P56747 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLDN6P56747 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 MIR298-201ENST00000401212 88 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 RN7SKP27-201ENST00000410684 333 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 RSU1P3-201ENST00000412878 835 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 HYALP1-201ENST00000417674 1279 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AC006065.1-201ENST00000422539 802 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 AL732292.1-201ENST00000426692 226 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AC004975.1-201ENST00000428733 208 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AC124944.2-201ENST00000429866 1242 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AL161722.2-201ENST00000434731 981 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 ARAFP2-201ENST00000440565 559 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 ARL2BPP10-201ENST00000446487 531 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AURKAPS2-201ENST00000454983 333 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 RPL23AP56-201ENST00000460778 453 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN6P56747 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN6P56747 SNORA70.11-201ENST00000515987 138 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 SNORA70.13-201ENST00000516116 138 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 RNA5SP392-201ENST00000516905 112 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 IGKV2D-10-201ENST00000520194 281 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN6P56747 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN6P56747 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN6P56747 AL359219.2-201ENST00000555184 348 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN6P56747 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CLDN6P56747 AC098935.2-201ENST00000604222 466 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AP001521.2-201ENST00000608772 546 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 AC068724.3-201ENST00000625906 87 ntBASIC4.78□□□□□ -1.64
CLDN6P56747 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN6P56747 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN6P56747 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms