Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 MTCYBP13-201ENST00000578634 1093 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AL162574.1-201ENST00000615702 950 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AL359757.1-201ENST00000623176 255 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HCFC1P51610 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 OR9G4-201ENST00000302957 984 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HCFC1P51610 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HCFC1P51610 SNORA77-201ENST00000408716 125 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 SNORA11-201ENST00000408789 128 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC119751.6-201ENST00000416712 186 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC004690.1-201ENST00000418216 328 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 RPS27AP7-201ENST00000422792 455 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC007559.1-201ENST00000428736 355 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 NDUFA5P1-201ENST00000433858 341 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 RPL7AP61-201ENST00000443410 636 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC000111.2-201ENST00000448200 210 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 MTCYBP14-201ENST00000457471 715 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 SEPT7P6-201ENST00000469999 1143 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 ATG10-AS1-201ENST00000504846 648 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 OR4R2P-201ENST00000530815 597 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 AC024933.1-201ENST00000608472 348 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AL356608.1-201ENST00000610034 820 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.41□□□□□ -1.7
HCFC1P51610 AC099654.6-201ENST00000636487 512 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 AP002512.4-202ENST00000641599 4530 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 AC079298.1-201ENST00000625026 1619 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 AC139426.3-201ENST00000605648 2059 ntBASIC4.41□□□□□ -1.7
HCFC1P51610 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.41□□□□□ -1.7
HCFC1P51610 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
HCFC1P51610 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HCFC1P51610 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 SAMMSON-226ENST00000642089 1582 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.4□□□□□ -1.7
HCFC1P51610 AC005261.2-201ENST00000593427 4258 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
HCFC1P51610 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HCFC1P51610 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.4□□□□□ -1.7
HCFC1P51610 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.4□□□□□ -1.7
HCFC1P51610 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
HCFC1P51610 NPM1P38-201ENST00000403835 865 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.4□□□□□ -1.7
HCFC1P51610 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.4□□□□□ -1.7
HCFC1P51610 TCEA1P1-201ENST00000449716 880 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 AC026979.1-201ENST00000492525 396 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.4□□□□□ -1.7
HCFC1P51610 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.4□□□□□ -1.7
HCFC1P51610 AC025674.1-201ENST00000507074 324 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 MRPS33P2-201ENST00000507850 322 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.4□□□□□ -1.7
HCFC1P51610 AC105129.1-201ENST00000560250 297 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.4□□□□□ -1.7
HCFC1P51610 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.4□□□□□ -1.7
HCFC1P51610 AC008814.1-201ENST00000603797 406 ntBASIC4.4□□□□□ -1.7
HCFC1P51610 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HCFC1P51610 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HCFC1P51610 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms