Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
MSX2P35548 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
MSX2P35548 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.68□□□□□ -1.5
MSX2P35548 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.68□□□□□ -1.5
MSX2P35548 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.68□□□□□ -1.5
MSX2P35548 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.68□□□□□ -1.5
MSX2P35548 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.68□□□□□ -1.5
MSX2P35548 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.68□□□□□ -1.5
MSX2P35548 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 MIR3611-201ENST00000584484 83 ntBASIC5.68□□□□□ -1.5
MSX2P35548 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.68□□□□□ -1.5
MSX2P35548 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.68□□□□□ -1.5
MSX2P35548 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 LSM1P2-201ENST00000604911 322 ntBASIC5.68□□□□□ -1.5
MSX2P35548 AC096553.1-201ENST00000605169 829 ntBASIC5.68□□□□□ -1.5
MSX2P35548 AL133481.2-203ENST00000607558 139 ntBASIC5.68□□□□□ -1.5
MSX2P35548 AC105227.2-201ENST00000615075 605 ntBASIC5.68□□□□□ -1.5
MSX2P35548 AC009878.1-201ENST00000621819 340 ntBASIC5.68□□□□□ -1.5
MSX2P35548 AL138693.1-201ENST00000622219 129 ntBASIC5.68□□□□□ -1.5
MSX2P35548 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.68□□□□□ -1.5
MSX2P35548 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.68□□□□□ -1.5
MSX2P35548 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MSX2P35548 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.68□□□□□ -1.5
MSX2P35548 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MSX2P35548 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
MSX2P35548 EIF3EP1-201ENST00000433978 1316 ntBASIC5.68□□□□□ -1.5
MSX2P35548 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MSX2P35548 AC011416.1-201ENST00000514947 1732 ntBASIC5.68□□□□□ -1.5
MSX2P35548 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MSX2P35548 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
MSX2P35548 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MSX2P35548 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.68□□□□□ -1.5
MSX2P35548 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MSX2P35548 SMG1P5-202ENST00000529428 4219 ntBASIC5.67□□□□□ -1.5
MSX2P35548 SMG1P2-201ENST00000566127 4221 ntBASIC5.67□□□□□ -1.5
MSX2P35548 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.67□□□□□ -1.5
MSX2P35548 AC007342.7-201ENST00000624610 2337 ntBASIC5.67□□□□□ -1.5
MSX2P35548 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 RNA5SP346-201ENST00000363541 121 ntBASIC5.67□□□□□ -1.5
MSX2P35548 RNU6-867P-201ENST00000364956 107 ntBASIC5.67□□□□□ -1.5
MSX2P35548 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.67□□□□□ -1.5
MSX2P35548 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.67□□□□□ -1.5
MSX2P35548 Y_RNA.465-201ENST00000384293 102 ntBASIC5.67□□□□□ -1.5
MSX2P35548 Y_RNA.517-201ENST00000384551 106 ntBASIC5.67□□□□□ -1.5
MSX2P35548 RNU6-1263P-201ENST00000384601 106 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AL157702.1-201ENST00000398764 426 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AL031577.2-201ENST00000404133 280 ntBASIC5.67□□□□□ -1.5
MSX2P35548 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.67□□□□□ -1.5
MSX2P35548 RNU2-16P-201ENST00000410712 136 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.67□□□□□ -1.5
MSX2P35548 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.67□□□□□ -1.5
MSX2P35548 OR5W1P-201ENST00000423705 938 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC093084.1-201ENST00000424233 687 ntBASIC5.67□□□□□ -1.5
MSX2P35548 MRPS21P2-201ENST00000424704 264 ntBASIC5.67□□□□□ -1.5
MSX2P35548 CENPIP1-201ENST00000425713 902 ntBASIC5.67□□□□□ -1.5
MSX2P35548 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.67□□□□□ -1.5
MSX2P35548 AC112492.2-201ENST00000432774 1030 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC138761.5-201ENST00000433967 325 ntBASIC5.67□□□□□ -1.5
MSX2P35548 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.67□□□□□ -1.5
MSX2P35548 COX4I1P2-201ENST00000447446 547 ntBASIC5.67□□□□□ -1.5
MSX2P35548 REG1CP-206ENST00000447469 496 ntBASIC5.67□□□□□ -1.5
MSX2P35548 PPIAP32-201ENST00000449940 472 ntBASIC5.67□□□□□ -1.5
MSX2P35548 YRDCP3-201ENST00000456507 480 ntBASIC5.67□□□□□ -1.5
MSX2P35548 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.67□□□□□ -1.5
MSX2P35548 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MSX2P35548 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.67□□□□□ -1.5
MSX2P35548 RPL12P31-201ENST00000478433 450 ntBASIC5.67□□□□□ -1.5
MSX2P35548 CR383656.1-201ENST00000484916 377 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC011825.1-201ENST00000484967 388 ntBASIC5.67□□□□□ -1.5
MSX2P35548 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.67□□□□□ -1.5
MSX2P35548 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 AC112198.1-201ENST00000505369 1220 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC021146.8-201ENST00000507455 733 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 AC008885.2-201ENST00000509506 930 ntBASIC5.67□□□□□ -1.5
MSX2P35548 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 SNORA31.13-201ENST00000516624 135 ntBASIC5.67□□□□□ -1.5
MSX2P35548 RNU6-1178P-201ENST00000516674 107 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MSX2P35548 HIGD1AP10-201ENST00000527837 282 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MSX2P35548 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.67□□□□□ -1.5
MSX2P35548 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 AC068135.2-201ENST00000569293 1028 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MSX2P35548 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.67□□□□□ -1.5
MSX2P35548 MIR4999-201ENST00000585029 91 ntBASIC5.67□□□□□ -1.5
MSX2P35548 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.67□□□□□ -1.5
MSX2P35548 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.67□□□□□ -1.5
MSX2P35548 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms