Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.64□□□□□ -1.51
MMP3P08254 RN7SL197P-201ENST00000466981 299 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AC093267.1-201ENST00000489176 961 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AC016550.1-201ENST00000505348 785 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 IMPA1P1-201ENST00000510718 842 ntBASIC5.64□□□□□ -1.51
MMP3P08254 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 RNU6-491P-201ENST00000516099 110 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MMP3P08254 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.64□□□□□ -1.51
MMP3P08254 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.64□□□□□ -1.51
MMP3P08254 AC016839.1-201ENST00000578162 867 ntBASIC5.64□□□□□ -1.51
MMP3P08254 ABI1P1-201ENST00000603375 1120 ntBASIC5.64□□□□□ -1.51
MMP3P08254 LSM1P2-201ENST00000604911 322 ntBASIC5.64□□□□□ -1.51
MMP3P08254 HMGB1P51-201ENST00000605166 638 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AL352984.2-202ENST00000613699 155 ntBASIC5.64□□□□□ -1.51
MMP3P08254 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MMP3P08254 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AC079298.2-201ENST00000623885 459 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AP001002.2-201ENST00000625137 386 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.64□□□□□ -1.51
MMP3P08254 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.64□□□□□ -1.51
MMP3P08254 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MMP3P08254 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.64□□□□□ -1.51
MMP3P08254 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MMP3P08254 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
MMP3P08254 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.63□□□□□ -1.51
MMP3P08254 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
MMP3P08254 SCARNA15-201ENST00000607520 4325 ntBASIC5.63□□□□□ -1.51
MMP3P08254 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.63□□□□□ -1.51
MMP3P08254 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 MIR620-201ENST00000385232 95 ntBASIC5.63□□□□□ -1.51
MMP3P08254 HMGB3P7-201ENST00000400214 611 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AL021331.1-201ENST00000402817 582 ntBASIC5.63□□□□□ -1.51
MMP3P08254 RPL10P10-201ENST00000403509 664 ntBASIC5.63□□□□□ -1.51
MMP3P08254 RNA5SP113-201ENST00000410486 84 ntBASIC5.63□□□□□ -1.51
MMP3P08254 TRIM60P17-201ENST00000415181 719 ntBASIC5.63□□□□□ -1.51
MMP3P08254 RAB9AP4-201ENST00000415230 609 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AC007559.1-201ENST00000428736 355 ntBASIC5.63□□□□□ -1.51
MMP3P08254 RPL19P16-201ENST00000433839 588 ntBASIC5.63□□□□□ -1.51
MMP3P08254 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.63□□□□□ -1.51
MMP3P08254 AC023271.1-201ENST00000445936 1090 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AL513533.1-201ENST00000453728 415 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.63□□□□□ -1.51
MMP3P08254 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.63□□□□□ -1.51
MMP3P08254 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
MMP3P08254 RPS26P24-201ENST00000497656 331 ntBASIC5.63□□□□□ -1.51
MMP3P08254 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.63□□□□□ -1.51
MMP3P08254 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AC136777.2-201ENST00000522979 358 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.63□□□□□ -1.51
MMP3P08254 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.63□□□□□ -1.51
MMP3P08254 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.63□□□□□ -1.51
MMP3P08254 AC027176.2-201ENST00000559166 746 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AC092868.3-201ENST00000560515 784 ntBASIC5.63□□□□□ -1.51
MMP3P08254 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.63□□□□□ -1.51
MMP3P08254 AC091042.1-201ENST00000579213 173 ntBASIC5.63□□□□□ -1.51
MMP3P08254 EIF1P5-201ENST00000585002 234 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.63□□□□□ -1.51
MMP3P08254 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.63□□□□□ -1.51
MMP3P08254 AC025857.2-201ENST00000602711 238 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AC005377.1-201ENST00000605126 456 ntBASIC5.63□□□□□ -1.51
MMP3P08254 AL391834.2-201ENST00000609982 546 ntBASIC5.63□□□□□ -1.51
MMP3P08254 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.63□□□□□ -1.51
MMP3P08254 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.63□□□□□ -1.51
MMP3P08254 AP000346.3-201ENST00000622821 210 ntBASIC5.63□□□□□ -1.51
MMP3P08254 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.63□□□□□ -1.51
MMP3P08254 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.63□□□□□ -1.51
MMP3P08254 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.63□□□□□ -1.51
MMP3P08254 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.63□□□□□ -1.51
MMP3P08254 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MMP3P08254 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
MMP3P08254 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.62□□□□□ -1.51
MMP3P08254 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 RNA5SP191-201ENST00000362585 102 ntBASIC5.62□□□□□ -1.51
MMP3P08254 RN7SKP145-201ENST00000363291 303 ntBASIC5.62□□□□□ -1.51
MMP3P08254 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
MMP3P08254 RNU6-398P-201ENST00000384143 109 ntBASIC5.62□□□□□ -1.51
MMP3P08254 RSL24D1P1-201ENST00000404972 493 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.62□□□□□ -1.51
MMP3P08254 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.62□□□□□ -1.51
MMP3P08254 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MMP3P08254 AC004074.1-201ENST00000421810 1063 ntBASIC5.62□□□□□ -1.51
MMP3P08254 AC009238.2-201ENST00000431026 355 ntBASIC5.62□□□□□ -1.51
MMP3P08254 MTCO1P45-201ENST00000431457 267 ntBASIC5.62□□□□□ -1.51
MMP3P08254 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms