Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AL158062.1-201ENST00000619632 745 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 MIR8080-201ENST00000622224 89 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AP001002.1-201ENST00000625148 1513 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC027228.2-201ENST00000567141 2154 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL672167.1-203ENST00000641299 2975 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 ECM1P2-201ENST00000503354 1577 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 TMSB4XP4-201ENST00000323496 618 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 SNORA2.3-201ENST00000383920 135 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 RNU6-891P-201ENST00000384280 111 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 RNU6-1263P-201ENST00000384601 106 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 GAPDHP15-201ENST00000398586 975 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 SNORA79B-201ENST00000410557 148 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 QRSL1P2-201ENST00000418582 964 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 RGS17P1-201ENST00000423358 553 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 TNPO1P1-201ENST00000423641 1138 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 SRSF1P1-201ENST00000424058 520 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC106901.1-201ENST00000425086 698 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC005033.1-201ENST00000428904 813 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 DYNLL1P7-201ENST00000429273 258 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 UBE2V2P3-201ENST00000433562 437 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 Z84478.1-201ENST00000438230 1219 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 TXNP5-201ENST00000441043 315 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC011753.3-201ENST00000443436 406 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL450996.1-201ENST00000445574 1202 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 RPL31P15-201ENST00000449770 338 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC006967.1-201ENST00000467608 589 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 NIP7P2-201ENST00000485801 544 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 OR9N1P-201ENST00000491296 333 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC025445.1-201ENST00000502728 300 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC090568.1-201ENST00000509499 856 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 UGT2A3P7-201ENST00000510485 734 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AP002981.1-201ENST00000517692 975 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 DUX4L52-201ENST00000549363 777 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 MTND6P33-201ENST00000571794 183 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL121834.1-201ENST00000572284 509 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC060766.1-201ENST00000590824 627 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC015813.4-201ENST00000610469 179 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC015922.4-201ENST00000612568 690 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC008115.3-201ENST00000614874 549 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AL669942.2-201ENST00000620352 697 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 AC002044.3-201ENST00000623314 541 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 MIR1910-201ENST00000636955 80 ntBASIC3.72□□□□□ -1.81
HLA-DQA1P01909 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQA1P01909 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
HLA-DQA1P01909 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DQA1P01909 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms