Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC137768.1-201ENST00000549998 553 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AL110118.1-201ENST00000553543 400 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 RN7SL52P-201ENST00000584271 284 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC005242.1-201ENST00000585658 438 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 RN7SL722P-201ENST00000617780 284 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 RN7SL565P-201ENST00000618246 284 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC010608.3-201ENST00000625048 527 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 MIR7641-1-201ENST00000627518 61 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 AC074101.1-201ENST00000637861 241 ntBASIC5.4□□□□□ -1.54
RAI2Q9Y5P3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 CDY11P-201ENST00000447168 1651 ntBASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.4□□□□□ -1.55
RAI2Q9Y5P3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 NCOA4P2-201ENST00000340589 1813 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 SNORA62-201ENST00000365493 153 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 RNU1-149P-201ENST00000390870 161 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 RPS26P4-201ENST00000431743 355 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 NPM1P18-201ENST00000434232 732 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC104634.1-201ENST00000452720 462 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC083982.1-201ENST00000485679 344 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC110775.1-201ENST00000513721 462 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC134698.5-201ENST00000519444 336 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 MIR1254-2-201ENST00000579553 63 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 RN7SL339P-201ENST00000580597 296 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC015849.2-201ENST00000605738 409 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC018754.1-201ENST00000607486 925 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC126915.2-201ENST00000610957 190 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC091953.3-201ENST00000623220 236 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AC016717.3-201ENST00000624730 554 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AP003485.1-201ENST00000625093 753 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 OR4G3P-201ENST00000633500 913 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.39□□□□□ -1.55
RAI2Q9Y5P3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AC079298.1-201ENST00000625026 1619 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 ADAM24P-201ENST00000398655 2101 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 OR55B1P-203ENST00000641518 2602 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AL354766.1-201ENST00000423396 542 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AL512637.2-201ENST00000431287 1256 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AL606490.7-201ENST00000433136 191 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 RPL7P40-201ENST00000481703 745 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 GTF2IP9-201ENST00000502460 301 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 MTCO1P31-201ENST00000506355 492 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 RNA5SP373-201ENST00000517271 95 ntBASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.38□□□□□ -1.55
RAI2Q9Y5P3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms