Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC004980.3-201ENST00000447046 365 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 RPL35AP28-201ENST00000459730 331 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC098583.1-201ENST00000480875 255 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.09□□□□□ -1.59
LIMK2P53671 RN7SKP147-201ENST00000517154 244 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 RPL23AP53-201ENST00000521854 457 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AP001922.4-201ENST00000526967 290 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK2P53671 OR8A2P-201ENST00000528631 952 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC005000.1-201ENST00000536192 288 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC116553.2-201ENST00000564203 463 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK2P53671 AC020915.5-201ENST00000596836 964 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK2P53671 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK2P53671 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LIMK2P53671 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.09□□□□□ -1.6
LIMK2P53671 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK2P53671 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK2P53671 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LIMK2P53671 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK2P53671 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LIMK2P53671 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK2P53671 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK2P53671 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LIMK2P53671 RNU6-386P-201ENST00000362650 107 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 AL353625.1-202ENST00000366273 571 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 MIR600-201ENST00000385007 98 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK2P53671 SEPT7P8-201ENST00000413308 775 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LIMK2P53671 RBMY2QP-201ENST00000429799 1147 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 Z85994.2-201ENST00000434327 452 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 AL356981.1-201ENST00000454879 684 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK2P53671 C1DP3-201ENST00000455013 423 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK2P53671 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK2P53671 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LIMK2P53671 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.08□□□□□ -1.6
LIMK2P53671 CDH12P4-201ENST00000517835 295 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 CDH12P3-201ENST00000517935 295 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK2P53671 CDH12P1-201ENST00000518435 295 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 MIR4472-2-201ENST00000582069 67 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.08□□□□□ -1.6
LIMK2P53671 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.08□□□□□ -1.6
LIMK2P53671 AP001784.1-201ENST00000624107 428 ntBASIC5.08□□□□□ -1.6
LIMK2P53671 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK2P53671 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK2P53671 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK2P53671 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
LIMK2P53671 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LIMK2P53671 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
LIMK2P53671 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.07□□□□□ -1.6
LIMK2P53671 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMK2P53671 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 RN7SKP113-201ENST00000363891 295 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.07□□□□□ -1.6
LIMK2P53671 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMK2P53671 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK2P53671 AC092647.2-201ENST00000452998 253 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 HIGD1AP8-201ENST00000453927 274 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 AC091685.2-201ENST00000454924 864 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 AC023424.1-201ENST00000496058 459 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 AC004980.4-201ENST00000513375 203 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 AC110775.1-201ENST00000513721 462 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 AC117525.1-201ENST00000515228 503 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.07□□□□□ -1.6
LIMK2P53671 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.07□□□□□ -1.6
LIMK2P53671 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.07□□□□□ -1.6
LIMK2P53671 AL445528.2-201ENST00000620582 470 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMK2P53671 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LIMK2P53671 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 Z95331.1-201ENST00000623075 23112 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.07□□□□□ -1.6
LIMK2P53671 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIMK2P53671 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LIMK2P53671 THAP12P4-201ENST00000528321 2266 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.07□□□□□ -1.6
LIMK2P53671 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIMK2P53671 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.06□□□□□ -1.6
LIMK2P53671 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms