Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.19□□□□□ -1.74
CD74P04233 AC005008.1-201ENST00000456151 612 ntBASIC4.19□□□□□ -1.74
CD74P04233 AP002371.1-201ENST00000463604 433 ntBASIC4.19□□□□□ -1.74
CD74P04233 RN7SL51P-201ENST00000468230 285 ntBASIC4.19□□□□□ -1.74
CD74P04233 RN7SL174P-201ENST00000475578 289 ntBASIC4.19□□□□□ -1.74
CD74P04233 RN7SL817P-201ENST00000480777 288 ntBASIC4.19□□□□□ -1.74
CD74P04233 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 RNA5SP360-201ENST00000516555 118 ntBASIC4.19□□□□□ -1.74
CD74P04233 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.19□□□□□ -1.74
CD74P04233 AC012339.2-201ENST00000523996 453 ntBASIC4.19□□□□□ -1.74
CD74P04233 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.19□□□□□ -1.74
CD74P04233 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.19□□□□□ -1.74
CD74P04233 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.19□□□□□ -1.74
CD74P04233 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 AC091979.2-201ENST00000607514 214 ntBASIC4.19□□□□□ -1.74
CD74P04233 MIR6768-201ENST00000610734 72 ntBASIC4.19□□□□□ -1.74
CD74P04233 AC234782.5-201ENST00000617723 324 ntBASIC4.19□□□□□ -1.74
CD74P04233 AC005086.4-201ENST00000623065 213 ntBASIC4.19□□□□□ -1.74
CD74P04233 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 AC138627.1-204ENST00000641894 765 ntBASIC4.19□□□□□ -1.74
CD74P04233 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 AL672167.1-205ENST00000641112 3080 ntBASIC4.19□□□□□ -1.74
CD74P04233 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CD74P04233 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CD74P04233 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.18□□□□□ -1.74
CD74P04233 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.18□□□□□ -1.74
CD74P04233 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 RNA5SP234-201ENST00000363916 119 ntBASIC4.18□□□□□ -1.74
CD74P04233 OR13C3-201ENST00000374781 1108 ntBASIC4.18□□□□□ -1.74
CD74P04233 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CD74P04233 RNA5SP339-201ENST00000390987 122 ntBASIC4.18□□□□□ -1.74
CD74P04233 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.18□□□□□ -1.74
CD74P04233 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 AC009302.1-201ENST00000417147 390 ntBASIC4.18□□□□□ -1.74
CD74P04233 AC004690.1-201ENST00000418216 328 ntBASIC4.18□□□□□ -1.74
CD74P04233 BX323845.1-201ENST00000432417 179 ntBASIC4.18□□□□□ -1.74
CD74P04233 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.18□□□□□ -1.74
CD74P04233 HMGB3P9-201ENST00000441799 583 ntBASIC4.18□□□□□ -1.74
CD74P04233 TDGF1P1-201ENST00000445734 527 ntBASIC4.18□□□□□ -1.74
CD74P04233 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.18□□□□□ -1.74
CD74P04233 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 Y_RNA.719-201ENST00000517156 106 ntBASIC4.18□□□□□ -1.74
CD74P04233 AC026688.1-201ENST00000520639 1168 ntBASIC4.18□□□□□ -1.74
CD74P04233 AC022616.2-201ENST00000523185 300 ntBASIC4.18□□□□□ -1.74
CD74P04233 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 GSTP1P1-201ENST00000548078 319 ntBASIC4.18□□□□□ -1.74
CD74P04233 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 AP000894.4-201ENST00000610185 483 ntBASIC4.18□□□□□ -1.74
CD74P04233 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 AC126175.1-201ENST00000617041 758 ntBASIC4.18□□□□□ -1.74
CD74P04233 AC131238.1-201ENST00000617135 328 ntBASIC4.18□□□□□ -1.74
CD74P04233 WBP1LP8-201ENST00000617401 327 ntBASIC4.18□□□□□ -1.74
CD74P04233 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 AC004232.3-201ENST00000622977 525 ntBASIC4.18□□□□□ -1.74
CD74P04233 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CD74P04233 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.18□□□□□ -1.74
CD74P04233 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.18□□□□□ -1.74
CD74P04233 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.18□□□□□ -1.74
CD74P04233 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CD74P04233 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CD74P04233 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD74P04233 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CD74P04233 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD74P04233 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD74P04233 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CD74P04233 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD74P04233 MAPK10-286ENST00000641208 8747 ntBASIC4.17□□□□□ -1.74
CD74P04233 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.17□□□□□ -1.74
CD74P04233 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD74P04233 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD74P04233 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CD74P04233 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD74P04233 MIR323A-201ENST00000362199 86 ntBASIC4.17□□□□□ -1.74
CD74P04233 RNA5SP319-201ENST00000362768 119 ntBASIC4.17□□□□□ -1.74
CD74P04233 MIR195-201ENST00000385194 87 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms