Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.65□□□□□ -1.5
COL2A1P02458 AC073091.2-201ENST00000603205 907 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.65□□□□□ -1.5
COL2A1P02458 BX005214.3-202ENST00000619809 325 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 AC006453.5-201ENST00000636451 619 ntBASIC5.65□□□□□ -1.5
COL2A1P02458 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL2A1P02458 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL2A1P02458 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL2A1P02458 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL2A1P02458 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL2A1P02458 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL2A1P02458 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 AL354766.1-201ENST00000423396 542 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 CYCSP24-201ENST00000445119 316 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL2A1P02458 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.64□□□□□ -1.51
COL2A1P02458 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.64□□□□□ -1.51
COL2A1P02458 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.64□□□□□ -1.51
COL2A1P02458 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 RN7SKP92-201ENST00000517266 244 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.64□□□□□ -1.51
COL2A1P02458 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.64□□□□□ -1.51
COL2A1P02458 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 AC084824.1-201ENST00000550917 1005 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.64□□□□□ -1.51
COL2A1P02458 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.64□□□□□ -1.51
COL2A1P02458 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.64□□□□□ -1.51
COL2A1P02458 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 SCARNA15-201ENST00000607520 4325 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.64□□□□□ -1.51
COL2A1P02458 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COL2A1P02458 AL137100.1-201ENST00000556703 1620 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL2A1P02458 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL2A1P02458 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.64□□□□□ -1.51
COL2A1P02458 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL2A1P02458 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 RN7SKP263-201ENST00000411194 309 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 AC007738.1-201ENST00000413892 348 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 AC140479.3-201ENST00000418944 1126 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 AC092162.1-201ENST00000432828 434 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 BMS1P19-201ENST00000433925 393 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 AC108463.1-201ENST00000450258 347 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 RPL7AP10-201ENST00000481016 791 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 NIP7P2-201ENST00000485801 544 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 AC115286.1-201ENST00000604298 434 ntBASIC5.64□□□□□ -1.51
COL2A1P02458 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL2A1P02458 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.64□□□□□ -1.51
COL2A1P02458 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL2A1P02458 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.63□□□□□ -1.51
COL2A1P02458 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.63□□□□□ -1.51
COL2A1P02458 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.63□□□□□ -1.51
COL2A1P02458 SOCS5P3-201ENST00000425115 1576 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.63□□□□□ -1.51
COL2A1P02458 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.63□□□□□ -1.51
COL2A1P02458 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.63□□□□□ -1.51
COL2A1P02458 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 DHX9P1-201ENST00000436565 3076 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.63□□□□□ -1.51
COL2A1P02458 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 AC140134.1-201ENST00000511830 3544 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL2A1P02458 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 AC079809.1-201ENST00000415468 276 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL2A1P02458 MRPS21P2-201ENST00000424704 264 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.63□□□□□ -1.51
COL2A1P02458 AC021660.1-201ENST00000465006 554 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 AC128716.1-201ENST00000475129 166 ntBASIC5.63□□□□□ -1.51
COL2A1P02458 NIFKP7-201ENST00000503365 834 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms