Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SHOX2O60902 ARL4AP5-201ENST00000404372 599 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 AL080315.1-201ENST00000406055 466 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 RN7SKP167-201ENST00000411047 285 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.91□□□□□ -1.62
SHOX2O60902 MAPRE1P3-201ENST00000435438 796 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 SCAND3P1-201ENST00000439854 1060 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 AL445665.1-202ENST00000452436 324 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 PPIAP19-201ENST00000486414 492 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 PPBPP1-201ENST00000510807 373 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.91□□□□□ -1.62
SHOX2O60902 CYCSP22-201ENST00000517555 339 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 AC012400.1-201ENST00000518452 381 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 AC090151.1-201ENST00000520784 730 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 NRBF2P4-201ENST00000520874 850 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.91□□□□□ -1.62
SHOX2O60902 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.91□□□□□ -1.62
SHOX2O60902 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.91□□□□□ -1.62
SHOX2O60902 AC007225.2-201ENST00000562529 256 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 AC124068.1-201ENST00000563131 678 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.91□□□□□ -1.62
SHOX2O60902 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.91□□□□□ -1.62
SHOX2O60902 AC132068.1-201ENST00000623805 459 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.91□□□□□ -1.62
SHOX2O60902 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.91□□□□□ -1.62
SHOX2O60902 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.91□□□□□ -1.62
SHOX2O60902 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SHOX2O60902 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SHOX2O60902 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.91□□□□□ -1.62
SHOX2O60902 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
SHOX2O60902 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.91□□□□□ -1.62
SHOX2O60902 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.91□□□□□ -1.62
SHOX2O60902 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHOX2O60902 AC139713.2-215ENST00000641428 5037 ntBASIC4.9□□□□□ -1.62
SHOX2O60902 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHOX2O60902 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SHOX2O60902 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.9□□□□□ -1.62
SHOX2O60902 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
SHOX2O60902 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.9□□□□□ -1.62
SHOX2O60902 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SHOX2O60902 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SHOX2O60902 RNA5SP104-201ENST00000410989 118 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 RPS4XP16-201ENST00000427198 791 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 SKP1P3-201ENST00000429280 487 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SHOX2O60902 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 RNU7-157P-201ENST00000459600 66 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 AC112184.1-201ENST00000505179 312 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 RNA5SP446-201ENST00000515955 82 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.9□□□□□ -1.63
SHOX2O60902 NANOGNBP2-201ENST00000544753 553 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 AC079600.1-201ENST00000550326 297 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.9□□□□□ -1.63
SHOX2O60902 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.9□□□□□ -1.63
SHOX2O60902 AL049872.1-201ENST00000556323 322 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.9□□□□□ -1.63
SHOX2O60902 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHOX2O60902 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.9□□□□□ -1.63
SHOX2O60902 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.9□□□□□ -1.63
SHOX2O60902 MIR6719-201ENST00000622428 87 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.9□□□□□ -1.63
SHOX2O60902 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 AC135068.12-201ENST00000637370 931 ntBASIC4.9□□□□□ -1.63
SHOX2O60902 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHOX2O60902 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHOX2O60902 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHOX2O60902 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SHOX2O60902 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SHOX2O60902 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.9□□□□□ -1.63
SHOX2O60902 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHOX2O60902 CDC27P2-201ENST00000425026 1922 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
SHOX2O60902 NAMPTP1-201ENST00000440465 2514 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 MTCO1P46-201ENST00000451639 1491 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHOX2O60902 OR56B2P-201ENST00000317102 954 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHOX2O60902 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.89□□□□□ -1.63
SHOX2O60902 RNU1-43P-201ENST00000365052 165 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHOX2O60902 RNA5SP39-201ENST00000411245 120 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 AP000534.2-201ENST00000412729 568 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.89□□□□□ -1.63
SHOX2O60902 AC093155.2-201ENST00000420734 937 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.89□□□□□ -1.63
SHOX2O60902 IPPKP1-201ENST00000422501 768 ntBASIC4.89□□□□□ -1.63
SHOX2O60902 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.89□□□□□ -1.63
SHOX2O60902 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.89□□□□□ -1.63
SHOX2O60902 RPL36AP39-201ENST00000445859 318 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms