Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 LINC00556-201ENST00000569603 412 ntBASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 MTND3P13-201ENST00000574391 343 ntBASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 COX6CP7-201ENST00000597056 208 ntBASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 AC125494.3-201ENST00000602759 455 ntBASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 AC008536.1-201ENST00000602872 669 ntBASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 DUXAP3-201ENST00000603616 594 ntBASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 AC024595.1-201ENST00000623088 387 ntBASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM54Q9BYV2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 AP005432.1-201ENST00000580891 3485 ntBASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
TRIM54Q9BYV2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 ENSAP3-201ENST00000312710 333 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 RN7SKP185-201ENST00000362813 326 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 RNA5SP433-201ENST00000364491 114 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 RNU6-549P-201ENST00000384433 107 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 RNA5SP91-201ENST00000390902 119 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 RN7SKP222-201ENST00000410651 315 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 TAF13P2-201ENST00000416876 286 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 NPM1P18-201ENST00000434232 732 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 OR52E7P-201ENST00000452394 933 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC069528.1-202ENST00000482888 637 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 RN7SL170P-201ENST00000487098 295 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC025458.1-201ENST00000506046 166 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC008565.1-201ENST00000509046 885 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC119751.5-201ENST00000514077 770 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 DEFB130C-202ENST00000530001 230 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC015802.2-201ENST00000589690 189 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC025588.2-201ENST00000604851 466 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC090525.3-201ENST00000605601 189 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC090607.5-201ENST00000615692 224 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AL121895.2-201ENST00000619558 447 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC024884.1-201ENST00000620583 399 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC109454.4-201ENST00000623411 649 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC015689.2-201ENST00000528172 1738 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 AC007996.1-201ENST00000620414 2821 ntBASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM54Q9BYV2 ADAM24P-201ENST00000398655 2101 ntBASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 AL031595.2-201ENST00000624215 19071 ntBASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 SUGT1P2-201ENST00000379452 992 ntBASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 HMGB3P7-201ENST00000400214 611 ntBASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 VN1R12P-201ENST00000403778 876 ntBASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 AC099535.1-201ENST00000408928 371 ntBASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 AL035660.1-201ENST00000422041 222 ntBASIC5.63□□□□□ -1.51
TRIM54Q9BYV2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms