Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
CHMP4AQ9BY43 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AL121839.2-201ENST00000565058 6943 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 DDX6P1-205ENST00000441966 1436 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 GTF3AP1-201ENST00000416942 1004 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AL031663.1-201ENST00000437445 219 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 MYO5BP2-201ENST00000449815 1277 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC079168.1-201ENST00000458741 345 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC074386.1-201ENST00000476560 767 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC091912.1-201ENST00000511351 248 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 NPM1P6-201ENST00000521088 871 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AL109741.3-201ENST00000561748 592 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AP005262.1-201ENST00000582646 997 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 MIR4512-201ENST00000583257 77 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 BX322635.1-201ENST00000605804 496 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AL355816.1-201ENST00000607951 118 ntBASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4AQ9BY43 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 MIR133B-201ENST00000362210 119 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 RPL31P52-201ENST00000407532 367 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 RPS23P9-201ENST00000448848 438 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 RPS6P2-201ENST00000454208 705 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC092754.1-201ENST00000472975 479 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 RN7SL177P-201ENST00000476596 299 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 RPS4XP14-201ENST00000493072 781 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 RPEP1-201ENST00000504507 658 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 RNA5SP34-201ENST00000516887 130 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC136777.2-201ENST00000522979 358 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 MIR4489-201ENST00000578869 62 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AP005403.1-201ENST00000579720 229 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC018809.2-201ENST00000602436 3823 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC025857.2-201ENST00000602711 238 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC005252.1-201ENST00000604518 1063 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 KATNBL1P1-201ENST00000605192 748 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC020658.4-201ENST00000613987 684 ntBASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
CHMP4AQ9BY43 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AC068870.1-201ENST00000563737 2455 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 OR55B1P-203ENST00000641518 2602 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 RNU6-452P-201ENST00000384406 107 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 DBIP1-201ENST00000401435 260 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 HSPA8P15-201ENST00000401676 786 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AL590290.1-201ENST00000405336 380 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 RPS20P25-201ENST00000412447 352 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 Z68694.1-201ENST00000413929 841 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AL355433.1-201ENST00000422804 300 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 MED6P1-201ENST00000439659 713 ntBASIC6.94□□□□□ -1.3
CHMP4AQ9BY43 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms