Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIX4Q9UIU6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.43□□□□□ -1.54
SIX4Q9UIU6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC007996.1-201ENST00000620414 2821 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 SNORA66-201ENST00000384792 133 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 CHMP1B2P-201ENST00000399581 597 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 NPM1P22-201ENST00000427761 952 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 COX6CP13-201ENST00000428703 226 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 MRPS33P4-201ENST00000434892 317 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AL158053.1-201ENST00000441503 453 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 TRY2P-201ENST00000448860 689 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 MTND5P8-201ENST00000449817 1083 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 OTX2P1-201ENST00000450956 354 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 RN7SL441P-201ENST00000492388 296 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC093815.1-201ENST00000508637 280 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC084824.5-201ENST00000612009 413 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC119674.1-220ENST00000641502 1048 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC004817.4-201ENST00000602396 3625 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 TRIM51GP-201ENST00000534741 1350 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AC005261.6-201ENST00000623072 1387 ntBASIC5.42□□□□□ -1.54
SIX4Q9UIU6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SIX4Q9UIU6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC007342.5-201ENST00000571340 2142 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 RN7SKP95-201ENST00000362860 303 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 SNORA5.1-201ENST00000384275 131 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AL589647.1-201ENST00000402485 466 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 RPS26P13-201ENST00000419030 330 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 RPL12P43-201ENST00000420608 499 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AL450023.3-201ENST00000440592 271 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 TXNP5-201ENST00000441043 315 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 OR7E125P-201ENST00000443450 846 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 RPL7P61-201ENST00000451721 751 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 HMGB1P4-201ENST00000455362 567 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC091180.1-201ENST00000462104 372 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 OR9N1P-201ENST00000491296 333 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 RN7SL244P-201ENST00000493405 297 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 NMNAT1P1-201ENST00000554095 876 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC027216.1-201ENST00000577726 685 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC090330.1-201ENST00000588646 764 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AC097372.4-201ENST00000625025 466 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 AL592494.2-201ENST00000425455 1548 ntBASIC5.41□□□□□ -1.54
SIX4Q9UIU6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SIX4Q9UIU6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 DDX18P6-201ENST00000450119 1997 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 AL513548.1-201ENST00000562904 1724 ntBASIC5.4□□□□□ -1.54
SIX4Q9UIU6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SIX4Q9UIU6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms