Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.64□□□□□ -1.67
SSX3Q99909 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX3Q99909 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 ABCC13-202ENST00000463099 3842 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.64□□□□□ -1.67
SSX3Q99909 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SSX3Q99909 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX3Q99909 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX3Q99909 AC114546.3-201ENST00000623582 1734 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX3Q99909 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSX3Q99909 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
SSX3Q99909 MTCO1P11-201ENST00000429111 1528 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX3Q99909 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX3Q99909 SNORA64.1-201ENST00000362600 132 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSX3Q99909 ATP5HP3-201ENST00000396994 486 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC019050.1-201ENST00000418508 492 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 RPL12P34-201ENST00000424532 479 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 CRIP1P1-201ENST00000427567 185 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX3Q99909 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX3Q99909 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.63□□□□□ -1.67
SSX3Q99909 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX3Q99909 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 AC096775.1-201ENST00000437724 448 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC087672.1-201ENST00000479876 766 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 RPS27AP16-201ENST00000492222 470 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC009120.1-201ENST00000493458 473 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC074255.1-201ENST00000511259 501 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX3Q99909 AC139365.2-201ENST00000517972 253 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC090424.1-201ENST00000535243 736 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AL049872.1-201ENST00000556323 322 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC023158.1-201ENST00000561632 1025 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AGGF1P7-201ENST00000562369 913 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 LINC00557-201ENST00000563184 1279 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX3Q99909 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX3Q99909 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX3Q99909 AC005520.3-201ENST00000602874 370 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 FO393422.1-201ENST00000603908 708 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC233280.2-201ENST00000603917 1070 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.63□□□□□ -1.67
SSX3Q99909 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.63□□□□□ -1.67
SSX3Q99909 CASC19-222ENST00000641321 1173 ntBASIC4.63□□□□□ -1.67
SSX3Q99909 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX3Q99909 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SSX3Q99909 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.63□□□□□ -1.67
SSX3Q99909 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSX3Q99909 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 AC104623.2-202ENST00000623477 4002 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX3Q99909 AC009229.4-201ENST00000623854 1947 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX3Q99909 DDX18P3-201ENST00000404856 2007 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 CASC19-204ENST00000641001 2055 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX3Q99909 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 SNORA51.1-201ENST00000363243 140 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 SNORD115-48-201ENST00000364764 76 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX3Q99909 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 Z86062.1-201ENST00000406773 777 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 UBE2V1P15-201ENST00000407776 448 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX3Q99909 RNA5SP498-201ENST00000411342 120 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX3Q99909 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX3Q99909 HYALP1-201ENST00000417674 1279 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX3Q99909 MTND4P24-201ENST00000424002 397 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AL121776.1-201ENST00000429337 372 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AP000281.1-201ENST00000444036 316 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX3Q99909 AC023512.1-201ENST00000444513 499 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AC005297.1-201ENST00000444765 862 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX3Q99909 AC073909.1-201ENST00000447112 999 ntBASIC4.62□□□□□ -1.67
SSX3Q99909 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms