Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 U3.23-201ENST00000391132 200 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 MIR1286-201ENST00000408112 78 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC124944.2-201ENST00000429866 1242 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 FAM96AP1-201ENST00000430879 482 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AL117351.1-201ENST00000438864 766 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AURKAPS1-201ENST00000451805 1212 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 snoU109.3-201ENST00000459477 145 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 CABYRP1-201ENST00000465493 1045 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 OR2AO1P-201ENST00000476497 403 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 PCNAP1-201ENST00000505363 709 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 RNA5SP92-201ENST00000516437 110 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 RN7SKP265-201ENST00000516448 223 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 UBTFL9-201ENST00000534504 1148 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 NMNAT1P5-201ENST00000559657 841 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 MTCO2P2-201ENST00000591258 225 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AL133247.2-201ENST00000603236 482 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC084782.3-201ENST00000612282 578 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC245389.2-201ENST00000616023 576 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC242843.1-201ENST00000618702 573 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC008115.4-201ENST00000619780 775 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 MIR6837-201ENST00000620884 64 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 MTND2P41-201ENST00000637599 773 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 SAMMSON-209ENST00000641222 1100 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC011493.1-201ENST00000596753 1632 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.13□□□□□ -1.43
PGBD1Q96JS3 C4BPAP1-201ENST00000415474 1893 ntBASIC6.13□□□□□ -1.43
PGBD1Q96JS3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 OR9G4-201ENST00000302957 984 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AL589994.1-201ENST00000404962 340 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 OR52B5P-201ENST00000435337 951 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 NPM1P19-201ENST00000450070 712 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC108161.1-201ENST00000461060 402 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC021660.1-201ENST00000465006 554 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 NPM1P17-201ENST00000479221 602 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 RN7SL447P-201ENST00000494711 245 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC015864.1-201ENST00000496512 544 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC082651.2-201ENST00000496833 166 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 HIGD1AP14-201ENST00000507617 282 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 RNU6-491P-201ENST00000516099 110 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 EEF1A1P37-201ENST00000522748 715 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 MORF4L1P3-201ENST00000525966 950 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC005000.1-201ENST00000536192 288 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 RN7SL356P-201ENST00000582228 248 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AL512329.2-201ENST00000607350 548 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 Z99129.2-201ENST00000619967 314 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 AC079298.1-201ENST00000625026 1619 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 OR52B5P-202ENST00000641118 1110 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 OR55B1P-203ENST00000641518 2602 ntBASIC6.12□□□□□ -1.43
PGBD1Q96JS3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.12□□□□□ -1.43
PGBD1Q96JS3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms