Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RN7SKP278-201ENST00000410504 342 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 HYALP1-201ENST00000417674 1279 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC009506.2-201ENST00000420635 840 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 PNRC2P1-201ENST00000423940 420 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RPL23AP4-201ENST00000427757 463 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC006335.2-201ENST00000437993 330 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC019185.1-201ENST00000442718 389 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC069540.1-201ENST00000446320 988 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AL606517.1-201ENST00000446914 387 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RNU6-599P-201ENST00000459383 107 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RNU6-1193P-201ENST00000459461 107 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RN7SL177P-201ENST00000476596 299 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RN7SL423P-201ENST00000486202 304 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RN7SL547P-201ENST00000490793 290 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RBM22P12-201ENST00000567098 1255 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AL135786.2-201ENST00000608422 615 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC124016.2-201ENST00000610058 665 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AL050303.3-201ENST00000613704 284 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC007204.2-201ENST00000615022 616 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RMST_10.1-201ENST00000616309 154 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC005840.5-201ENST00000619166 599 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RNU6-368P-201ENST00000620928 107 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RNU6-538P-201ENST00000622329 107 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 CU639417.4-201ENST00000623928 207 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AC126544.2-201ENST00000625174 749 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 HSPD1P11-201ENST00000508643 1702 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 HSPD1P14-201ENST00000432666 1618 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 UGT2B26P-201ENST00000508672 1613 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL645568.2-201ENST00000432815 1337 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC007938.2-201ENST00000604666 2634 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 RN7SKP160-201ENST00000363804 340 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 RN7SKP28-201ENST00000364770 305 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 RNA5SP131-201ENST00000365452 119 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 RNA5SP30-201ENST00000365552 115 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 RPL22P22-201ENST00000395439 379 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL354766.1-201ENST00000423396 542 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 MTCYBP32-201ENST00000427945 1084 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL359265.1-201ENST00000440296 795 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AP000797.2-201ENST00000475768 606 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC020779.1-201ENST00000478757 796 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 RN7SL214P-201ENST00000487317 265 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 RN7SL629P-201ENST00000489622 285 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 GTF2IP9-201ENST00000502460 301 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC025459.1-201ENST00000504072 156 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 HIGD1AP18-201ENST00000520730 278 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AP000916.1-201ENST00000533869 835 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC084759.1-201ENST00000561168 290 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC106734.1-201ENST00000568646 663 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL121652.1-201ENST00000608851 448 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 MIR6133-201ENST00000617057 108 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 MT-RNR2-201ENST00000387347 1559 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.6□□□□□ -1.35
CHMP4CQ96CF2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC079097.1-201ENST00000512187 1399 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms