Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.48□□□□□ -1.53
CTNNA1P35221 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA1P35221 AC108359.1-201ENST00000616451 1211 ntBASIC5.48□□□□□ -1.53
CTNNA1P35221 BNIP3P41-202ENST00000616656 861 ntBASIC5.48□□□□□ -1.53
CTNNA1P35221 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA1P35221 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.48□□□□□ -1.53
CTNNA1P35221 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA1P35221 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.48□□□□□ -1.53
CTNNA1P35221 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA1P35221 OR51C1P-202ENST00000641159 1444 ntBASIC5.48□□□□□ -1.53
CTNNA1P35221 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA1P35221 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA1P35221 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.47□□□□□ -1.53
CTNNA1P35221 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 OR6C64P-201ENST00000419708 825 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AC009238.2-201ENST00000431026 355 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 AC092013.1-201ENST00000438795 332 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 AC245517.2-201ENST00000442890 346 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.47□□□□□ -1.53
CTNNA1P35221 EIF4A1P11-201ENST00000451239 222 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 RNU7-27P-201ENST00000459281 62 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 EIF1P7-201ENST00000487533 337 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AC090543.1-201ENST00000492168 485 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.47□□□□□ -1.53
CTNNA1P35221 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.47□□□□□ -1.53
CTNNA1P35221 RN7SKP70-201ENST00000516655 271 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.47□□□□□ -1.53
CTNNA1P35221 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CTNNA1P35221 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.47□□□□□ -1.53
CTNNA1P35221 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.47□□□□□ -1.53
CTNNA1P35221 AC022884.3-201ENST00000579571 248 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 AC018695.5-201ENST00000605872 315 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AC010245.2-201ENST00000606908 1167 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AL391834.1-201ENST00000609609 560 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AC037198.3-201ENST00000616754 526 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AC118658.2-201ENST00000618697 459 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 AC020763.5-201ENST00000623298 430 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CTNNA1P35221 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CTNNA1P35221 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.47□□□□□ -1.53
CTNNA1P35221 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTNNA1P35221 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
CTNNA1P35221 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CTNNA1P35221 AC063976.2-201ENST00000425667 3556 ntBASIC5.46□□□□□ -1.53
CTNNA1P35221 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTNNA1P35221 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.46□□□□□ -1.53
CTNNA1P35221 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
CTNNA1P35221 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CTNNA1P35221 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 RN7SKP74-201ENST00000362849 309 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 RNU6-666P-201ENST00000363499 107 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 MIR105-1-201ENST00000385222 81 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CTNNA1P35221 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.46□□□□□ -1.54
CTNNA1P35221 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 NAP1L4P2-201ENST00000425958 899 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.46□□□□□ -1.54
CTNNA1P35221 AC073109.1-201ENST00000445066 978 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 RPL36AP39-201ENST00000445859 318 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.46□□□□□ -1.54
CTNNA1P35221 RPL7P40-201ENST00000481703 745 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 AC010627.1-201ENST00000503819 1294 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.46□□□□□ -1.54
CTNNA1P35221 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.46□□□□□ -1.54
CTNNA1P35221 BNIP3P1-201ENST00000547295 580 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 AC067805.1-201ENST00000559344 470 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 AC018552.3-201ENST00000567416 561 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.46□□□□□ -1.54
CTNNA1P35221 FO393422.1-201ENST00000603908 708 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 AL133406.3-201ENST00000606817 541 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 BX005214.3-202ENST00000619809 325 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 AC074276.2-201ENST00000619891 348 ntBASIC5.46□□□□□ -1.54
CTNNA1P35221 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms